30#include "MantidBeamline/ComponentInfo.h"
31#include "MantidBeamline/DetectorInfo.h"
32#include "MantidBeamline/SpectrumInfo.h"
44#include "MantidTypes/SpectrumDefinition.h"
46#include <boost/algorithm/string.hpp>
47#include <boost/lexical_cast.hpp>
48#include <boost/regex.hpp>
100 m_run = other->m_run;
119 }
catch (std::exception &) {
124 std::ostringstream out;
127 const auto instName = inst->getName();
128 out <<
"Instrument: ";
129 if (!instName.empty()) {
130 out << instName <<
" (" << inst->getValidFromDate().toFormattedString(
"%Y-%b-%d") <<
" to "
131 << inst->getValidToDate().toFormattedString(
"%Y-%b-%d") <<
")";
132 const auto instFilename = inst->getFilename();
133 if (!instFilename.empty()) {
134 out <<
"Instrument from: " << instFilename;
144 for (
auto const &itFilename : paramFileVector) {
145 out <<
"Parameters from: " << itFilename;
151 std::string msgNA =
"not available";
152 if (runStart.empty())
156 out <<
"Run start: " << runStart <<
"\n";
157 out <<
"Run end: " << runEnd <<
"\n";
159 if (this->
sample().hasOrientedLattice()) {
161 out <<
"Sample: a " << std::fixed << std::setprecision(1) << latt.
a() <<
", b " << latt.
b() <<
", c " << latt.
c();
162 out <<
"; alpha " << std::fixed << std::setprecision(0) << latt.
alpha() <<
", beta " << latt.
beta() <<
", gamma "
173 if (numDets != detInfo.
size())
174 throw std::runtime_error(
"ExperimentInfo: size mismatch between "
175 "DetectorInfo and number of detectors in "
191 if (
sptr_instrument != (instr->isParametrized() ? instr->baseInstrument() : instr)) {
194 if (instr->isParametrized()) {
199 const auto &source = *instr->getParameterMap();
200 m_parmap = std::make_shared<ParameterMap>(source);
205 m_parmap->rebuildBeamlineFrom(source);
208 m_parmap = std::make_shared<ParameterMap>();
262 RTP() : radius(0.0), haveRadius(false), theta(0.0), phi(0.0) {}
269struct ParameterValue {
271 : info(paramInfo), runData(run) {}
274 if (info.m_logfileID.empty())
275 return boost::lexical_cast<double>(info.m_value);
277 const TimeROI *roi = &runData.getTimeROI();
278 return info.createParamValue(runData.getTimeSeriesProperty<
double>(info.m_logfileID), roi);
281 operator int() {
return boost::lexical_cast<int>(info.m_value); }
283 if (boost::iequals(info.m_value,
"true"))
285 else if (boost::iequals(info.m_value,
"yes"))
301bool isScaleParameter(
const std::string &
name) {
return (
name ==
"scalex" ||
name ==
"scaley"); }
303bool isRedundantPosOrRot(
const std::string &
name) {
305 return (
name.size() == 4) &&
309template <
class T> T getParam(
const std::string ¶mType,
const std::string ¶mValue) {
310 const std::string
name =
"dummy";
312 param->fromString(paramValue);
313 return param->value<T>();
316void updatePosition(
ComponentInfo &componentInfo,
const size_t compIndex,
const V3D &newRelPos) {
318 if (componentInfo.
hasParent(compIndex)) {
319 const auto parentIndex = componentInfo.
parent(compIndex);
326void updateRotation(
ComponentInfo &componentInfo,
const size_t compIndex,
const Quat &newRelRot) {
328 if (componentInfo.
hasParent(compIndex)) {
329 const auto parentIndex = componentInfo.
parent(compIndex);
335void adjustPositionsFromScaleFactor(
ComponentInfo &componentInfo,
const size_t compIndex,
const std::string ¶mName,
339 if (paramName ==
"scalex")
357 const auto &runData =
run();
368 const auto instrument = parInstrument->baseInstrument();
369 const auto ¶mInfoFromIDF = instrument->getLogfileCache();
371 std::map<const IComponent *, RTP> rtpParams;
381 for (
const auto &item : paramInfoFromIDF) {
382 const auto ¶mInfo = item.second;
386 const std::string ¶mN = paramInfo->m_paramName;
392 if (paramN.compare(1, 9,
"-position") == 0) {
393 auto &rtpValues = rtpParams[paramInfo->m_component];
396 double value = ParameterValue(*paramInfo, runData);
397 if (paramN.compare(0, 1,
"r") == 0) {
398 rtpValues.radius =
value;
399 rtpValues.haveRadius =
true;
400 }
else if (paramN.compare(0, 1,
"t") == 0)
401 rtpValues.theta =
value;
402 else if (paramN.compare(0, 1,
"p") == 0)
403 rtpValues.phi =
value;
404 if (rtpValues.haveRadius) {
406 pos.
spherical(rtpValues.radius, rtpValues.theta, rtpValues.phi);
407 const auto compIndex = compInfo.indexOfOrInvalid(paramInfo->m_component->getComponentID());
415 }
catch (std::exception &exc) {
416 g_log.
information() <<
"Unable to add component parameter '" << paramN <<
"'. Error: " << exc.what();
423 for (
const auto &[compIndex, newRelPos] : posAndRot.
positions()) {
424 updatePosition(compInfo, compIndex, newRelPos);
426 for (
const auto &[compIndex, newRelRot] : posAndRot.
rotations()) {
427 updateRotation(compInfo, compIndex, newRelRot);
431 for (
const auto &item : paramMap.
entries()) {
432 if (isScaleParameter(item.second->name())) {
433 const auto compIndex = compInfo.indexOfOrInvalid(item.first);
435 adjustPositionsFromScaleFactor(compInfo, compIndex, item.second->name(), item.second->value<
double>());
469 SpectrumDefinition specDef;
470 for (
const auto detID : detIDs) {
473 specDef.add(detIndex);
474 }
catch (std::out_of_range &) {
490 throw std::runtime_error(
"ExperimentInfo::updateCachedDetectorGrouping: "
491 "Cannot update -- grouping information not "
528 return m_run.access();
559 if (logName.empty()) {
560 throw std::invalid_argument(
"ExperimentInfo::getLog - No instrument parameter named \"" + log +
561 "\". Cannot access full log name");
584 if (logName.empty()) {
585 throw std::invalid_argument(
"ExperimentInfo::getLog - No instrument parameter named \"" + log +
586 "\". Cannot access full log name");
597 const Run &thisRun =
run();
626 static const char *emodeTag =
"deltaE-mode";
627 std::string emodeStr;
628 if (
run().hasProperty(emodeTag)) {
632 emodeStr = param->asString();
667 const std::vector<std::string> ¶meterNames)
const {
669 for (
auto ¶meterName : parameterNames) {
672 efixed = par->value<
double>();
674 std::vector<double> efixedVec = detector->getNumberParameter(parameterName);
675 if (efixedVec.empty()) {
676 int detid = detector->getID();
678 efixedVec = detectorSingle->getNumberParameter(parameterName);
680 if (!efixedVec.empty()) {
686 std::ostringstream os;
687 os <<
"ExperimentInfo::getEFixed - Indirect mode efixed requested but "
688 "detector has no Efixed parameter attached. ID="
689 << detector->getID();
690 throw std::runtime_error(os.str());
706 for (
auto ¶meterName : {
"Ei",
"EnergyRequested",
"EnergyEstimate"}) {
713 throw std::runtime_error(
"Experiment logs do not contain an Ei "
714 "value. Have you run GetEi?");
719 throw std::runtime_error(
"ExperimentInfo::getEFixed - Indirect mode "
720 "efixed requested without a valid detector.");
723 throw std::runtime_error(
"ExperimentInfo::getEFixed - EFixed requested for "
724 "elastic mode, don't know what to do!");
732 pmap.addDouble(det.get(),
"Efixed",
value);
748 }
catch (std::runtime_error &) {
751 date = Types::Core::DateAndTime::getCurrentTime().toISO8601String();
767 }
catch (std::runtime_error &) {
784 }
catch (std::runtime_error &) {
800 throw std::runtime_error(
"Cannot return reference to NULL DetectorInfo");
809 throw std::runtime_error(
"Cannot return reference to NULL DetectorInfo");
848 [](
char i) { return i == 1; })) {
851 [](
char i) { return i == 1; })) {
853#pragma omp parallel for
854 for (int64_t i = 0; i < size; ++i) {
870 throw std::runtime_error(
"Cannot return reference to NULL ComponentInfo");
877 throw std::runtime_error(
"Cannot return reference to NULL ComponentInfo");
884 throw std::runtime_error(
"Cannot return reference to NULL InstrumentMetadata");
891 if (spectrumDefinitions) {
892 m_spectrumInfo = std::make_unique<Beamline::SpectrumInfo>(std::move(spectrumDefinitions));
907 return compInfo.
name(compInfo.
root());
936 size_t specIndex = 0;
937 for (
const auto detID : detIDs) {
940 SpectrumDefinition specDef;
941 specDef.add(detIndex);
943 m_spectrumInfo->setSpectrumDefinition(specIndex, std::move(specDef));
961 if (saveLegacyInstrument) {
962 instrument->saveNexus(file,
"instrument");
975 bool saveLogs)
const {
979 instrument->saveNexus(file,
"instrument");
993 if (sampleVersion == 0) {
996 file->openGroup(
"sample",
"NXsample");
1011 if (sampleVersion == 0) {
1014 file->openGroup(
"sample",
"NXsample");
1024 std::string ¶meterStr,
const std::string &prefix) {
1041 std::string ¶meterStr) {
1059 std::string ¶meterStr) {
1062 file->openGroup(
"instrument",
"NXinstrument");
1065 std::string instrumentName;
1066 std::string instrumentXml;
1091 file->openGroup(
"instrument",
"NXinstrument");
1094 std::string instrumentName;
1095 std::string instrumentXml;
1112 std::string &instrumentXml) {
1114 file->readData(
"name", instrumentName);
1117 file->openGroup(
"instrument_xml",
"NXnote");
1118 file->readData(
"data", instrumentXml);
1121 g_log.
debug(std::string(
"Unable to load instrument_xml: ") + ex.what());
1135 std::string &instrumentXml) {
1139 std::string instrumentFilename;
1140 if (!instrumentXml.empty()) {
1144 instrumentFilename = nxFilename;
1145 g_log.
debug() <<
"Using instrument IDF XML text contained in nexus file.\n";
1155 if (!instrumentXml.empty() && !instrumentName.empty()) {
1161 if (InstrumentDataService::Instance().doesExist(instrumentNameMangled)) {
1163 instr = InstrumentDataService::Instance().retrieve(instrumentNameMangled);
1173 instr->parseTreeAndCacheBeamline();
1176 InstrumentDataService::Instance().add(instrumentNameMangled, instr);
1192 }
catch (std::exception &e) {
1193 g_log.
error() <<
"Error loading instrument IDF file: " << filename <<
".\n";
1207 file->openGroup(
"instrument_parameter_map",
"NXnote");
1208 file->readData(
"data", parameterStr);
1211 g_log.
debug(std::string(
"Unable to load instrument_parameter_map: ") + ex.what());
1212 g_log.
information(
"Parameter map entry missing from NeXus file. Continuing without it.");
1236 const std::string visibilityKey =
"visible:";
1238 for (
auto itr = splitter.
begin(); itr !=
iend; ++itr) {
1240 if (tokens.
count() < 4)
1242 std::string comp_name = tokens[0];
1250 if (comp_name.find(
"detID:") != std::string::npos) {
1251 const auto detID =
static_cast<detid_t>(std::stoi(comp_name.substr(6)));
1255 compIndex = detInfo.
indexOf(detID);
1256 }
catch (std::out_of_range &) {
1257 g_log.
warning() <<
"Cannot find detector " << detID <<
'\n';
1261 compIndex = compInfo.indexOfFullName(comp_name);
1269 compIndex = compInfo.indexOfOrInvalid(comp->getComponentID());
1272 g_log.
warning() <<
"Cannot find component " << comp_name <<
'\n';
1280 std::string paramValue = tokens[3];
1281 auto size =
static_cast<int>(tokens.
count());
1282 for (
int i = 4; i < size; i++)
1283 paramValue +=
";" + tokens[i];
1284 const auto ¶mType = tokens[1];
1285 const auto ¶mName = tokens[2];
1286 auto ¶mVisibility = tokens[size - 1];
1287 if (paramVisibility.find(visibilityKey) > paramVisibility.size())
1288 paramVisibility =
"true";
1291 paramVisibility.substr(paramVisibility.find(visibilityKey) + visibilityKey.size(), paramVisibility.size());
1292 paramValue.erase(paramValue.find(visibilityKey) - 1, paramValue.size());
1294 const auto paramDescr = std::string(
"");
1295 if (paramName ==
"masked") {
1296 auto value = getParam<bool>(paramType, paramValue);
1299 const auto componentIndex = compIndex;
1300 if (!compInfo.isDetector(componentIndex)) {
1301 throw std::runtime_error(
"Found masking for a non-detector "
1302 "component. This is not possible");
1308 }
else if (isPositionParameter(paramName)) {
1313 const auto newRelPos = getParam<V3D>(paramType, paramValue);
1314 updatePosition(compInfo, compIndex, newRelPos);
1315 }
else if (isRotationParameter(paramName)) {
1320 const auto newRelRot = getParam<Quat>(paramType, paramValue);
1321 updateRotation(compInfo, compIndex, newRelRot);
1322 }
else if (!isRedundantPosOrRot(paramName)) {
1325 if (isScaleParameter(paramName))
1326 adjustPositionsFromScaleFactor(compInfo, compIndex, paramName, getParam<double>(paramType, paramValue));
1337 if (paramType ==
"fitting") {
1338 std::string fittingFunction;
1342 const auto firstComma = paramValue.find(
',');
1343 if (firstComma != std::string::npos) {
1344 const auto secondComma = paramValue.find(
',', firstComma + 1);
1345 if (secondComma != std::string::npos) {
1347 fittingFunction = paramValue.substr(firstComma + 1, secondComma - firstComma - 1);
1349 const auto firstNonSpace = fittingFunction.find_first_not_of(
" \t");
1350 if (firstNonSpace != std::string::npos) {
1351 const auto lastNonSpace = fittingFunction.find_last_not_of(
" \t");
1352 fittingFunction = fittingFunction.substr(firstNonSpace, lastNonSpace - firstNonSpace + 1);
1355 fittingFunction.clear();
1358 if (!fittingFunction.empty()) {
1359 pmap.addFittingParameter(compIndex, paramName, fittingFunction, paramValue, ¶mDescr, paramVisibility);
1361 pmap.add(paramType, compIndex, paramName, paramValue, ¶mDescr, paramVisibility);
1364 pmap.add(paramType, compIndex, paramName, paramValue, ¶mDescr, paramVisibility);
1383 const std::string &category = paramInfo.
m_type;
1384 ParameterValue paramValue(paramInfo,
1387 const std::string *pDescription =
nullptr;
1390 std::string pVisible =
"true";
1395 if (
name ==
"masked") {
1396 bool value(paramValue);
1402 throw std::runtime_error(
"Found masking for a non-detector component. This is not possible");
1408 }
else if (
name ==
"x" ||
name ==
"y" ||
name ==
"z") {
1417 }
else if (
name ==
"rot" ||
name ==
"rotx" ||
name ==
"roty" ||
name ==
"rotz") {
1422 g_log.
warning() <<
"Ignoring instrument parameter '" <<
name <<
"': it does not name a rotation axis.\n";
1424 }
else if (category ==
"fitting") {
1425 std::ostringstream str;
1436 }
else if (category ==
"string") {
1438 }
else if (category ==
"bool") {
1440 }
else if (category ==
"int") {
1458IPropertyManager::getValue<Mantid::API::ExperimentInfo_sptr>(
const std::string &
name)
const {
1463 std::string message =
1464 "Attempt to assign property " +
name +
" to incorrect type. Expected shared_ptr<ExperimentInfo>.";
1465 throw std::runtime_error(message);
1471IPropertyManager::getValue<Mantid::API::ExperimentInfo_const_sptr>(
const std::string &
name)
const {
1474 return prop->operator()();
1476 std::string message =
1477 "Attempt to assign property " +
name +
" to incorrect type. Expected const shared_ptr<ExperimentInfo>.";
1478 throw std::runtime_error(message);
double value
The value of the point.
std::map< DeltaEMode::Type, std::string > index
Mantid::Kernel::Quat(ComponentInfo::* rotation)(const size_t) const
This class is shared by a few Workspace types and holds information related to a particular experimen...
void loadEmbeddedInstrumentInfoNexus(Nexus::File *file, std::string &instrumentName, std::string &instrumentXml)
Attempt to load instrument embedded in Nexus file. *file must have instrument group open.
Geometry::DetectorInfo & mutableDetectorInfo()
Return a non-const reference to the DetectorInfo object.
Run & mutableRun()
Writable version of the run object.
Kernel::cow_ptr< Sample > m_sample
The information on the sample environment.
const SpectrumInfo & spectrumInfo() const
Return a reference to the SpectrumInfo object.
Geometry::InstrumentMetadata const & instrumentMetadata() const
std::shared_ptr< Geometry::ParameterMap > m_parmap
Parameters modifying the base instrument.
ExperimentInfo()
Default constructor.
void setInstumentFromXML(const std::string &nxFilename, std::string &instrumentName, std::string &instrumentXml)
Set the instrument given the name and XML leading from IDF file if XML string is empty.
std::shared_ptr< Geometry::InstrumentMetadata > m_instrumentMetadata
Geometry::ComponentInfo & mutableComponentInfo()
const Geometry::DetectorInfo & detectorInfo() const
Return a const reference to the DetectorInfo object.
virtual ExperimentInfo * cloneExperimentInfo() const
Clone us.
std::unordered_map< detid_t, size_t > m_det2group
Detector grouping information.
std::shared_ptr< Geometry::DetectorInfo > m_detectorInfo
double getEFixed(const detid_t detID) const
Easy access to the efixed value for this run & detector ID.
void readParameterMap(const std::string ¶meterStr)
Populate the parameter map given a string.
virtual void populateIfNotLoaded() const
Called as the first operation of most public methods.
void invalidateSpectrumDefinition(const size_t index)
Notifies the ExperimentInfo that a spectrum definition has changed.
void saveExperimentInfoNexus(Nexus::File *file, bool saveLegacyInstrument=true) const
Saves this experiment description to the open NeXus file.
size_t numberOfDetectorGroups() const
Returns the number of detector groups.
void updateSpectrumDefinitionIfNecessary(const size_t index) const
std::string getAvailableWorkspaceStartDate() const
Return workspace start date as a formatted string (strftime, as returned by Types::Core::DateAndTime)...
std::string loadInstrumentXML(const std::string &filename)
Loads the contents of a file and returns the string The file is assumed to be an IDF,...
virtual ~ExperimentInfo()
Virtual destructor.
std::shared_ptr< Geometry::ComponentInfo > m_componentInfo
The 2.0 instrument layers, of which this object is the primary owner.
virtual void updateCachedDetectorGrouping(const size_t index) const
Update detector grouping for spectrum with given index.
void cacheDefaultDetectorGrouping() const
Sets up a default detector grouping.
std::mutex m_spectrumInfoMutex
void copyExperimentInfoFrom(const ExperimentInfo *other)
Copy everything from the given experiment object.
const Run & run() const
Run details object access.
std::string getInstrumentName() const
Return the name of the instrument from the ComponentInfo object.
void loadSampleAndLogInfoNexus(Nexus::File *file, std::string const &prefix)
Load the sample and log info from an open NeXus file.
const Geometry::ParameterMap & constInstrumentParameters() const
Const version.
Geometry::Instrument_const_sptr getInstrument() const
Returns the parameterized instrument.
void populateWithParameter(Geometry::ParameterMap ¶mMap, Geometry::PositionAndRotationAccumulator &posAndRot, const std::string &name, const Geometry::XMLInstrumentParameter ¶mInfo, const Run &runData)
Fill with given instrument parameter.
Kernel::DeltaEMode::Type getEMode() const
Returns the emode for this run.
std::unique_ptr< Beamline::SpectrumInfo > m_spectrumInfo
void loadExperimentInfoNexus(std::string const &nxFilename, Nexus::File *file, std::string ¶meterStr, std::string const &prefix)
const Sample & sample() const
Sample accessors.
void setEFixed(const detid_t detID, const double value)
Set the efixed value for a given detector ID.
double getEFixedGivenEMode(const std::shared_ptr< const Geometry::IDetector > &detector, const Kernel::DeltaEMode::Type emode) const
Easy access to the efixed value for this run & detector.
double getEFixedForIndirect(const std::shared_ptr< const Geometry::IDetector > &detector, const std::vector< std::string > ¶meterNames) const
const std::string toString() const
Returns a string description of the object.
const Geometry::ParameterMap & instrumentParameters() const
Returns the set of parameters modifying the base instrument (const-version)
int getRunNumber() const
Utility method to get the run number.
std::string getAvailableWorkspaceEndDate() const
Return workspace end date as a formatted string (strftime style, as returned by Kernel::DateAdnTime) ...
const Geometry::ComponentInfo & componentInfo() const
std::string getWorkspaceStartDate() const
Returns the start date for this experiment (or current time if no info available)
void setInstrument(const Geometry::Instrument_const_sptr &instr)
Instrument accessors.
std::unique_ptr< SpectrumInfo > m_spectrumInfoWrapper
void setSharedRun(Kernel::cow_ptr< Run > run)
Set the run object. Use in particular to clear run without copying old run.
void setDetectorGrouping(const size_t index, const std::set< detid_t > &detIDs) const
Sets the detector grouping for the spectrum with the given index.
Kernel::cow_ptr< Run > sharedRun()
Return the cow ptr of the run.
ExperimentInfo & operator=(const ExperimentInfo &)
Implements the copy assignment operator.
void setSpectrumDefinitions(Kernel::cow_ptr< std::vector< SpectrumDefinition > > spectrumDefinitions)
Sets the SpectrumDefinition for all spectra.
std::vector< char > m_spectrumDefinitionNeedsUpdate
double getLogAsSingleValue(const std::string &log) const
Access a single value from a log for this experiment.
SpectrumInfo & mutableSpectrumInfo()
Return a non-const reference to the SpectrumInfo object.
void adoptBeamline()
Take co-ownership of whatever m_parmap currently holds.
void loadInstrumentParametersNexus(Nexus::File *file, std::string ¶meterStr)
Load instrument parameters from an open Nexus file in Instrument group if found there.
void setNumberOfDetectorGroups(const size_t count) const
Sets the number of detector groups.
Sample & mutableSample()
Writable version of the sample object.
Geometry::Instrument_const_sptr sptr_instrument
The base (unparametrized) instrument.
void loadInstrumentInfoNexus(const std::string &nxFilename, Nexus::File *file, std::string ¶meterStr)
Load the instrument from an open NeXus file.
void populateInstrumentParameters()
Add parameters to the instrument parameter map that are defined in instrument definition file or para...
Kernel::Property * getLog(const std::string &log) const
Access a log for this experiment.
void invalidateAllSpectrumDefinitions()
Sets flags for all spectrum definitions indicating that they need to be updated.
Kernel::cow_ptr< Run > m_run
The run information.
static std::string getInstrumentFilename(const std::string &instrumentName, const std::string &date="")
Get the IDF using the instrument name and date.
const Types::Core::DateAndTime endTime() const
Return the run end time.
bool hasProperty(const std::string &name) const
Does the property exist on the object.
const Types::Core::DateAndTime startTime() const
Return the run start time.
Kernel::Property * getProperty(const std::string &name) const
Returns the named property as a pointer.
double getPropertyAsSingleValue(const std::string &name, Kernel::Math::StatisticType statistic=Kernel::Math::Mean) const
Returns a property as a single double value from its name.
HeldType getPropertyValueAsType(const std::string &name) const
Get the value of a property as the given TYPE.
This class stores information regarding an experimental run as a series of log entries.
void saveNexus(Nexus::File *file, const std::string &group, bool keepOpen=false) const override
Save the run to a NeXus file with a given group name.
void loadNexus(Nexus::File *file, const std::string &group, const std::string &prefix, bool keepOpen=false) override
Load the run from a NeXus file with a given group name.
This class stores information about the sample used in particular run.
int loadNexus(Nexus::File *file, const std::string &group)
Load the object from an open NeXus file.
void saveNexus(Nexus::File *file, const std::string &group) const
Save the object to an open NeXus file.
const Geometry::OrientedLattice & getOrientedLattice() const
Get a reference to the sample's OrientedLattice.
API::SpectrumInfo is an intermediate step towards a SpectrumInfo that is part of Instrument-2....
const Kernel::cow_ptr< std::vector< SpectrumDefinition > > & sharedSpectrumDefinitions() const
std::shared_ptr< const IComponent > getComponentByName(const std::string &cname, int nlevels=0) const override
Returns a pointer to the first component of assembly encountered with the given name.
ComponentInfo : Provides a component centric view on to the instrument.
bool hasParent(const size_t componentIndex) const
void setRotation(size_t componentIndex, const Kernel::Quat &newRotation)
size_t parent(const size_t componentIndex) const
Kernel::Quat rotation(const size_t componentIndex) const
Kernel::V3D position(const size_t componentIndex) const
size_t indexOfOrInvalid(Geometry::IComponent const *id) const
The index for a component ID, or invalidIndex if it is not part of this instrument.
size_t indexOf(Geometry::IComponent const *id) const
const std::string & name(const size_t componentIndex) const
void setPosition(size_t componentIndex, const Kernel::V3D &newPosition)
static constexpr size_t invalidIndex
Returned by indexOfOrInvalid() for a component ID that is not part of this instrument.
Geometry::DetectorInfo is an intermediate step towards a DetectorInfo that is part of Instrument-2....
void setMasked(const size_t index, bool masked)
Set the mask flag of the detector with given index. Not thread safe.
size_t indexOf(const detid_t id) const
Returns the index of the detector with the given detector ID.
size_t size() const
Returns the size of the DetectorInfo, i.e., the number of detectors in the instrument.
virtual ComponentID getComponentID() const =0
Returns the ComponentID - a unique identifier of the component.
Creates an instrument data from a XML instrument description file.
std::shared_ptr< Instrument > parseXML(Kernel::ProgressBase *progressReporter)
Parse XML contents.
std::string getMangledName()
Handle used in the singleton constructor for instrument file should append the value file sha-1 check...
std::size_t getNumberDetectors(bool skipMonitors=false) const
std::shared_ptr< const Instrument > baseInstrument() const
Pointer to the 'real' instrument, for parametrized instruments.
Class to implement UB matrix.
static std::shared_ptr< Instrument > createInstrument(const std::shared_ptr< const Instrument > &base, const std::shared_ptr< ParameterMap > &map)
Create a parameterized instrument from the given base and ParameterMap.
static std::shared_ptr< Parameter > create(const std::string &className, const std::string &name, const std::string &visible="true")
Creates an instance of a parameter.
Parameter map iterator typedef.
const std::vector< std::string > & getParameterFilenames() const
Returns a list of all the parameter files loaded.
bool contains(const IComponent *comp, const std::string &name, const std::string &type="") const
Does the named parameter exist for the given component and type (std::string version)
void addInt(const IComponent *comp, const std::string &name, const std::string &value, const std::string *const pDescription=nullptr, const std::string &pVisible="true")
Adds an int value to the parameter map.
std::shared_ptr< Parameter > getRecursive(const IComponent *comp, const std::string &name, const std::string &type="") const
Use get() recursively to see if can find param in all parents of comp and given type (std::string ver...
static const std::string & rot()
std::string getString(const IComponent *comp, const std::string &name, bool recursive=false) const
Return the value of a parameter as a string.
void addString(const IComponent *comp, const std::string &name, const std::string &value, const std::string *const pDescription=nullptr, const std::string &pVisible="true")
Adds a std::string value to the parameter map.
std::vector< Entry > entries() const
Every stored parameter with its owning component, in component-index order.
void addDouble(const IComponent *comp, const std::string &name, const std::string &value, const std::string *const pDescription=nullptr, const std::string &pVisible="true")
Adds a double value to the parameter map.
static const std::string & pos()
Return string to be used in the map.
void addFittingParameter(const IComponent *comp, const std::string &name, const std::string &fittingFunction, const std::string &value, const std::string *const pDescription=nullptr, const std::string &pVisible="true")
Add a fitting parameter.
void addBool(const IComponent *comp, const std::string &name, const std::string &value, const std::string *const pDescription=nullptr, const std::string &pVisible="true")
Adds a bool value to the parameter map.
std::shared_ptr< Parameter > get(const IComponent *comp, const std::string &name, const std::string &type="") const
Get a parameter with a given name and type (std::string version)
Collects the position and rotation an instrument definition specifies piecemeal, so that each can be ...
void setCoordinate(const size_t componentIndex, const std::string &axis, const double value, const Kernel::V3D ¤tPosition)
Set one coordinate.
void setPosition(const size_t componentIndex, const Kernel::V3D &position)
Set the whole position at once, discarding any coordinates accumulated so far.
std::map< size_t, Kernel::V3D > positions() const
The accumulated position for each component that had any coordinate set.
bool setRotationAngle(const size_t componentIndex, const std::string &axis, const double degrees)
Set one rotation angle, in degrees.
std::map< size_t, Kernel::Quat > rotations() const
The composed rotation for each component that had any angle set.
double alpha() const
Get lattice parameter.
double a(int nd) const
Get lattice parameter a1-a3 as function of index (0-2)
double c() const
Get lattice parameter.
double beta() const
Get lattice parameter.
double b() const
Get lattice parameter.
double gamma() const
Get lattice parameter.
This class is used to store information about parameters in XML instrument definition files and instr...
const Geometry::IComponent * m_component
value from the log value
const std::string m_value
rather then extracting value from logfile,
const std::string m_type
type of the data, e.g. int, double or string
const std::string m_description
if present, contains help string, describing the parameter
const std::string m_visible
if present, describes whether the parameter shall be visible in InstrumentViewer
std::shared_ptr< Kernel::Interpolation > m_interpolation
evaluating the formula
const std::string m_fittingFunction
specific to fitting parameter
std::string m_penaltyFactor
parameter specify lower and upper bound in that order
const std::string m_formula
specify fitting function
const std::string m_resultUnit
expected result (output) unit from
const std::vector< std::string > m_constraint
specific to fitting
const std::string m_tie
specific to fitting parameter specify any tie
const std::string m_formulaUnit
formula to use for setting this parameter
Exception for when an item is not found in a collection.
The Logger class is in charge of the publishing messages from the framework through various channels.
void debug(const std::string &msg)
Logs at debug level.
void error(const std::string &msg)
Logs at error level.
void warning(const std::string &msg)
Logs at warning level.
void information(const std::string &msg)
Logs at information level.
The concrete, templated class for properties.
Base class for properties.
virtual std::string value() const =0
Returns the value of the property as a string.
void rotate(V3D &) const
Rotate a vector.
Iterator begin()
Iterator referring to first element in the container.
@ TOK_IGNORE_EMPTY
ignore empty tokens
@ TOK_TRIM
remove leading and trailing whitespace from tokens
Iterator end()
Iterator referring to the past-the-end element in the container.
std::size_t count() const
Get the total number of tokens.
TimeROI : Object that holds information about when the time measurement was active.
void spherical(const double R, const double theta, const double phi) noexcept
Sets the vector position based on spherical coordinates.
Implements a copy on write data template.
Class that provides for a standard Nexus exception.
std::shared_ptr< const ExperimentInfo > ExperimentInfo_const_sptr
Shared pointer to const ExperimentInfo.
Kernel::Logger g_log("ExperimentInfo")
static logger object
std::shared_ptr< ExperimentInfo > ExperimentInfo_sptr
Shared pointer to ExperimentInfo.
MANTID_API_DLL void applyRectangularDetectorScaleToComponentInfo(Geometry::ComponentInfo &componentInfo, Geometry::IComponent *componentId, const double scaleX, const double scaleY)
Helpers for resizing RectangularDetectors.
std::shared_ptr< Parameter > Parameter_sptr
Typedef for the shared pointer.
std::shared_ptr< const Mantid::Geometry::IDetector > IDetector_const_sptr
Shared pointer to IDetector (const version)
std::shared_ptr< const Instrument > Instrument_const_sptr
Shared pointer to an const instrument object.
std::shared_ptr< Instrument > Instrument_sptr
Shared pointer to an instrument object.
MANTID_KERNEL_DLL std::string strip(const std::string &A)
strip pre/post spaces
MANTID_KERNEL_DLL std::string loadFile(const std::string &filename)
Loads the entire contents of a text file into a string.
int convert(const std::string &A, T &out)
Convert a string into a number.
int32_t detid_t
Typedef for a detector ID.
Generate a tableworkspace to store the calibration results.
std::string to_string(const wide_integer< Bits, Signed > &n)
static Type fromString(const std::string &modeStr)
Returns the emode from the given string.
Type
Define the available energy transfer modes It is important to assign enums proper numbers,...