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Public Member Functions | Protected Member Functions | Private Member Functions | Private Attributes | List of all members
Mantid::Algorithms::Q1D2 Class Referencefinal

Takes account of the effects of gravity for instruments where the y-axis points upwards, for example SANS instruments. More...

#include <Q1D2.h>

Inheritance diagram for Mantid::Algorithms::Q1D2:
Mantid::API::Algorithm Mantid::API::IAlgorithm Mantid::Kernel::IPropertyManager

Public Member Functions

const std::string category () const override
 Algorithm's category for identification. More...
 
const std::string name () const override
 Algorithm's name. More...
 
 Q1D2 ()
 Default constructor. More...
 
const std::vector< std::string > seeAlso () const override
 Function to return all of the seeAlso algorithms related to this algorithm. More...
 
const std::string summary () const override
 Summary of algorithms purpose. More...
 
int version () const override
 Algorithm's version. More...
 
- Public Member Functions inherited from Mantid::API::Algorithm
 Algorithm ()
 Constructor. More...
 
 Algorithm (const Algorithm &)=delete
 
Algorithmoperator= (const Algorithm &)=delete
 
 ~Algorithm () override
 Virtual destructor. More...
 
void initialize () override
 Initialization method invoked by the framework. More...
 
bool execute () override final
 The actions to be performed by the algorithm on a dataset. More...
 
void addTimer (const std::string &name, const Kernel::time_point_ns &begin, const Kernel::time_point_ns &end)
 
void executeAsChildAlg () override
 Execute as a Child Algorithm. More...
 
std::map< std::string, std::string > validateInputs () override
 Perform validation of ALL the input properties of the algorithm. More...
 
ExecutionState executionState () const override
 Gets the current execution state. More...
 
ResultState resultState () const override
 Gets the current result State. More...
 
bool isInitialized () const override
 Has the Algorithm already been initialized. More...
 
bool isExecuted () const override
 Has the Algorithm already been executed successfully. More...
 
bool isRunning () const override
 True if the algorithm is running. More...
 
bool isReadyForGarbageCollection () const override
 True if the algorithm is ready for garbage collection. More...
 
bool isChild () const override
 To query whether algorithm is a child. More...
 
void setChild (const bool isChild) override
 To set whether algorithm is a child. More...
 
void enableHistoryRecordingForChild (const bool on) override
 Change the state of the history recording flag. More...
 
bool isRecordingHistoryForChild ()
 
void setAlwaysStoreInADS (const bool doStore) override
 Do we ALWAYS store in the AnalysisDataService? This is set to true for python algorithms' child algorithms. More...
 
bool getAlwaysStoreInADS () const override
 Returns true if we always store in the AnalysisDataService. More...
 
void setRethrows (const bool rethrow) override
 Set whether the algorithm will rethrow exceptions. More...
 
Poco::ActiveResult< bool > executeAsync () override
 Asynchronous execution. More...
 
void addObserver (const Poco::AbstractObserver &observer) const override
 Add an observer for a notification. More...
 
void removeObserver (const Poco::AbstractObserver &observer) const override
 Remove an observer. More...
 
void cancel () override
 Raises the cancel flag. More...
 
bool getCancel () const
 Returns the cancellation state. More...
 
Kernel::LoggergetLogger () const
 Returns a reference to the logger. More...
 
void setLogging (const bool value) override
 Logging can be disabled by passing a value of false. More...
 
bool isLogging () const override
 returns the status of logging, True = enabled More...
 
void setLoggingOffset (const int value) override
 gets the logging priority offset More...
 
int getLoggingOffset () const override
 returns the logging priority offset More...
 
void setAlgStartupLogging (const bool enabled) override
 disable Logging of start and end messages More...
 
bool getAlgStartupLogging () const override
 get the state of Logging of start and end messages More...
 
void setChildStartProgress (const double startProgress) const override
 setting the child start progress More...
 
void setChildEndProgress (const double endProgress) const override
 setting the child end progress More...
 
std::string toString () const override
 Serialize an object to a string. More...
 
::Json::Value toJson () const override
 Serialize an object to a json object. More...
 
virtual std::shared_ptr< AlgorithmcreateChildAlgorithm (const std::string &name, const double startProgress=-1., const double endProgress=-1., const bool enableLogging=true, const int &version=-1)
 Create a Child Algorithm. More...
 
void setupAsChildAlgorithm (const Algorithm_sptr &algorithm, const double startProgress=-1., const double endProgress=-1., const bool enableLogging=true)
 Setup algorithm as child algorithm. More...
 
void trackAlgorithmHistory (std::shared_ptr< AlgorithmHistory > parentHist)
 set whether we wish to track the child algorithm's history and pass it the parent object to fill. More...
 
void findWorkspaces (WorkspaceVector &workspaces, unsigned int direction, bool checkADS=false) const
 Populate lists of the workspace properties for a given direction (InOut workspaces are included in both input/output) More...
 
virtual bool checkGroups ()
 Check the input workspace properties for groups. More...
 
virtual bool processGroups ()
 Process WorkspaceGroup inputs. More...
 
void copyNonWorkspaceProperties (IAlgorithm *alg, int periodNum)
 Copy all the non-workspace properties from this to alg. More...
 
const Parallel::Communicator & communicator () const
 Returns a const reference to the (MPI) communicator of the algorithm. More...
 
void setCommunicator (const Parallel::Communicator &communicator)
 Sets the (MPI) communicator of the algorithm. More...
 
void declareProperty (std::unique_ptr< Kernel::Property > p, const std::string &doc="") override
 Add a property to the list of managed properties. More...
 
void declareOrReplaceProperty (std::unique_ptr< Kernel::Property > p, const std::string &doc="") override
 Add or replace property in the list of managed properties. More...
 
void resetProperties () override
 Reset property values back to initial values (blank or default values) More...
 
void setProperties (const std::string &propertiesJson, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >(), bool createMissing=false) override
 Set the ordered list of properties by one string of values, separated by semicolons. More...
 
void setProperties (const ::Json::Value &jsonValue, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >(), bool createMissing=false) override
 Sets all the declared properties from a json object. More...
 
void setPropertiesWithString (const std::string &propertiesString, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >()) override
 Sets all the declared properties from a string. More...
 
void setPropertyValue (const std::string &name, const std::string &value) override
 Set the value of a property by string N.B. More...
 
void setPropertyValueFromJson (const std::string &name, const Json::Value &value) override
 Set the value of a property by Json::Value object. More...
 
void setPropertyOrdinal (const int &index, const std::string &value) override
 Set the value of a property by an index N.B. More...
 
virtual void copyPropertiesFrom (const Algorithm &alg)
 Make m_properties point to the same PropertyManager as alg.m_properties. More...
 
bool existsProperty (const std::string &name) const override
 Checks whether the named property is already in the list of managed property. More...
 
bool validateProperties () const override
 Validates all the properties in the collection. More...
 
size_t propertyCount () const override
 Count the number of properties under management. More...
 
std::string getPropertyValue (const std::string &name) const override
 Get the value of a property as a string. More...
 
const std::vector< Kernel::Property * > & getProperties () const override
 Get the list of managed properties. More...
 
std::vector< std::string > getDeclaredPropertyNames () const noexcept override
 Return the list of declared property names. More...
 
TypedValue getProperty (const std::string &name) const override
 Get the value of a property. More...
 
std::string asString (bool withDefaultValues=false) const override
 Return the property manager serialized as a string. More...
 
::Json::Value asJson (bool withDefaultValues=false) const override
 Return the property manager serialized as a json object. More...
 
bool isDefault (const std::string &name) const
 
void removeProperty (const std::string &name, const bool delproperty=true) override
 Removes the property from management. More...
 
std::unique_ptr< Kernel::PropertytakeProperty (const size_t index) override
 Removes the property from management and returns a pointer to it. More...
 
void clear () override
 Clears all properties under management. More...
 
void afterPropertySet (const std::string &) override
 Override this method to perform a custom action right after a property was set. More...
 
void filterByTime (const Types::Core::DateAndTime &, const Types::Core::DateAndTime &) override
 
void splitByTime (std::vector< Kernel::SplittingInterval > &, std::vector< Kernel::PropertyManager * >) const override
 
void filterByProperty (const Kernel::TimeSeriesProperty< bool > &, const std::vector< std::string > &) override
 
Kernel::PropertygetPointerToProperty (const std::string &name) const override
 Get a property by name. More...
 
Kernel::PropertygetPointerToPropertyOrdinal (const int &index) const override
 Get a property by an index. More...
 
virtual void declareProperty (std::unique_ptr< Property > p, const std::string &doc="")=0
 Function to declare properties (i.e. store them) More...
 
template<typename T >
void declareProperty (const std::string &name, T value, IValidator_sptr validator=std::make_shared< NullValidator >(), const std::string &doc="", const unsigned int direction=Direction::Input)
 Add a property of the template type to the list of managed properties. More...
 
template<typename T >
void declareProperty (const std::string &name, T value, const std::string &doc, const unsigned int direction=Direction::Input)
 Add a property to the list of managed properties with no validator. More...
 
template<typename T >
void declareProperty (const std::string &name, T value, const unsigned int direction)
 Add a property of the template type to the list of managed properties. More...
 
void declareProperty (const std::string &name, const char *value, IValidator_sptr validator=std::make_shared< NullValidator >(), const std::string &doc=std::string(), const unsigned int direction=Direction::Input)
 Specialised version of declareProperty template method to prevent the creation of a PropertyWithValue of type const char* if an argument in quotes is passed (it will be converted to a string). More...
 
void declareProperty (const std::string &name, const char *value, const std::string &doc, IValidator_sptr validator=std::make_shared< NullValidator >(), const unsigned int direction=Direction::Input)
 Specialised version of declareProperty template method to prevent the creation of a PropertyWithValue of type const char* if an argument in quotes is passed (it will be converted to a string). More...
 
void declareProperty (const std::string &name, const char *value, const unsigned int direction)
 Add a property of string type to the list of managed properties. More...
 
const std::string category () const override
 function to return a category of the algorithm. More...
 
const std::vector< std::string > categories () const override
 Function to return all of the categories that contain this algorithm. More...
 
const std::string categorySeparator () const override
 Function to return the separator token for the category string. More...
 
const std::vector< std::string > seeAlso () const override
 Function to return all of the seeAlso (these are not validated) algorithms related to this algorithm.A default implementation is provided. More...
 
const std::string alias () const override
 function to return any aliases to the algorithm; A default implementation is provided More...
 
const std::string aliasDeprecated () const override
 Expiration date (in ISO8601 format) for the algorithm aliases; default implementation for no expiration date. More...
 
const std::string helpURL () const override
 function to return URL for algorithm documentation; A default implementation is provided. More...
 
template<typename T , typename = typename std::enable_if<std::is_convertible<T *, MatrixWorkspace *>::value>::type>
std::tuple< std::shared_ptr< T >, Indexing::SpectrumIndexSet > getWorkspaceAndIndices (const std::string &name) const
 
template<typename T1 , typename T2 , typename = typename std::enable_if<std::is_convertible<T1 *, MatrixWorkspace *>::value>::type, typename = typename std::enable_if<std::is_convertible<T2 *, std::string *>::value || std::is_convertible<T2 *, std::vector<int64_t> *>::value>::type>
void setWorkspaceInputProperties (const std::string &name, const std::shared_ptr< T1 > &wksp, IndexType type, const T2 &list)
 
template<typename T1 , typename T2 , typename = typename std::enable_if<std::is_convertible<T1 *, MatrixWorkspace *>::value>::type, typename = typename std::enable_if<std::is_convertible<T2 *, std::string *>::value || std::is_convertible<T2 *, std::vector<int64_t> *>::value>::type>
void setWorkspaceInputProperties (const std::string &name, const std::string &wsName, IndexType type, const T2 &list)
 
const std::string workspaceMethodName () const override
 
const std::vector< std::string > workspaceMethodOn () const override
 
const std::string workspaceMethodInputProperty () const override
 
AlgorithmID getAlgorithmID () const override
 Algorithm ID. More...
 
virtual void addObserver (const Poco::AbstractObserver &observer) const =0
 Add an observer for a notification. More...
 
virtual const std::string alias () const =0
 function to return any aliases of the algorithm. More...
 
virtual const std::string aliasDeprecated () const =0
 Expiration date (in ISO8601 format) for the algorithm aliases. Empty if no expiration date. More...
 
virtual void cancel ()=0
 Raises the cancel flag. More...
 
virtual const std::vector< std::string > categories () const =0
 Function to return all of the categories that contain this algorithm. More...
 
virtual const std::string category () const =0
 function to return a category of the algorithm. More...
 
virtual const std::string categorySeparator () const =0
 Function to return the separator token for the category string. More...
 
virtual void enableHistoryRecordingForChild (const bool on)=0
 If true history will be recorded for a child. More...
 
virtual bool execute ()=0
 System execution. More...
 
virtual void executeAsChildAlg ()=0
 Execute as a Child Algorithm, with try/catch. More...
 
virtual Poco::ActiveResult< bool > executeAsync ()=0
 Asynchronous execution of the algorithm. More...
 
virtual ExecutionState executionState () const =0
 Gets the current execution state. More...
 
virtual AlgorithmID getAlgorithmID () const =0
 Algorithm ID. More...
 
virtual bool getAlgStartupLogging () const =0
 get the state of Logging of start and end messages More...
 
virtual bool getAlwaysStoreInADS () const =0
 To query whether the output is stored in the analysis data service. More...
 
virtual int getLoggingOffset () const =0
 returns the logging priority offset More...
 
virtual const std::string helpURL () const =0
 function to return an optional URL for documentation. More...
 
virtual void initialize ()=0
 Initialization method invoked by the framework. More...
 
virtual bool isChild () const =0
 To query whether algorithm is a child. Default to false. More...
 
virtual bool isExecuted () const =0
 Check whether the algorithm has been executed sucessfully. More...
 
virtual bool isInitialized () const =0
 Check whether the algorithm is initialized properly. More...
 
virtual bool isLogging () const =0
 returns the status of logging, True = enabled More...
 
virtual bool isReadyForGarbageCollection () const =0
 True if the algorithm is ready for garbage collection. More...
 
virtual bool isRunning () const =0
 True if the algorithm is running. More...
 
virtual const std::string name () const =0
 function to return a name of the algorithm, must be overridden in all algorithms More...
 
virtual void removeObserver (const Poco::AbstractObserver &observer) const =0
 Remove an observer. More...
 
virtual ResultState resultState () const =0
 Gets the currnet result State. More...
 
virtual const std::vector< std::string > seeAlso () const =0
 Function to return all of the seeAlso algorithms related to this algorithm. More...
 
virtual void setAlgStartupLogging (const bool enabled)=0
 disable Logging of start and end messages More...
 
virtual void setAlwaysStoreInADS (const bool doStore)=0
 Set whether we always store the output in the analysis data service. More...
 
virtual void setChild (const bool isChild)=0
 To set whether algorithm is a child. More...
 
virtual void setChildEndProgress (const double endProgress) const =0
 setting the child end progress More...
 
virtual void setChildStartProgress (const double startProgress) const =0
 setting the child start progress More...
 
virtual void setLogging (const bool value)=0
 Logging can be disabled by passing a value of false. More...
 
virtual void setLoggingOffset (const int value)=0
 gets the logging priority offset More...
 
virtual void setRethrows (const bool rethrow)=0
 To query whether an algorithm should rethrow exceptions when executing. More...
 
virtual const std::string summary () const =0
 function returns a summary message that will be displayed in the default GUI, and in the help. More...
 
virtual ::Json::Value toJson () const =0
 Serialize an algorithm as Json. More...
 
virtual std::string toString () const =0
 Serialize an algorithm. More...
 
virtual std::map< std::string, std::string > validateInputs ()=0
 Method checking errors on ALL the inputs, before execution. More...
 
virtual int version () const =0
 function to return a version of the algorithm, must be overridden in all algorithms More...
 
Algorithms As Methods
- Public Member Functions inherited from Mantid::Kernel::IPropertyManager
virtual ::Json::Value asJson (bool withDefaultValues=false) const =0
 Return the property manager serialized as a json object. More...
 
virtual std::string asString (bool withDefaultValues=false) const =0
 Return the property manager serialized as a string. More...
 
virtual void declareOrReplaceProperty (std::unique_ptr< Property > p, const std::string &doc="")=0
 Function to declare properties (i.e. store them) More...
 
void declareProperty (const std::string &name, const char *value, const std::string &doc, IValidator_sptr validator=std::make_shared< NullValidator >(), const unsigned int direction=Direction::Input)
 Specialised version of declareProperty template method to prevent the creation of a PropertyWithValue of type const char* if an argument in quotes is passed (it will be converted to a string). More...
 
void declareProperty (const std::string &name, const char *value, const unsigned int direction)
 Add a property of string type to the list of managed properties. More...
 
void declareProperty (const std::string &name, const char *value, IValidator_sptr validator=std::make_shared< NullValidator >(), const std::string &doc=std::string(), const unsigned int direction=Direction::Input)
 Specialised version of declareProperty template method to prevent the creation of a PropertyWithValue of type const char* if an argument in quotes is passed (it will be converted to a string). More...
 
template<typename T >
void declareProperty (const std::string &name, T value, const std::string &doc, const unsigned int direction=Direction::Input)
 Add a property to the list of managed properties with no validator. More...
 
template<typename T >
void declareProperty (const std::string &name, T value, const unsigned int direction)
 Add a property of the template type to the list of managed properties. More...
 
template<typename T >
void declareProperty (const std::string &name, T value, IValidator_sptr validator=std::make_shared< NullValidator >(), const std::string &doc="", const unsigned int direction=Direction::Input)
 Add a property of the template type to the list of managed properties. More...
 
virtual void declareProperty (std::unique_ptr< Property > p, const std::string &doc="")=0
 Function to declare properties (i.e. store them) More...
 
virtual bool existsProperty (const std::string &name) const =0
 Checks whether the named property is already in the list of managed property. More...
 
virtual void filterByProperty (const TimeSeriesProperty< bool > &, const std::vector< std::string > &)=0
 
virtual void filterByTime (const Types::Core::DateAndTime &, const Types::Core::DateAndTime &)=0
 
virtual std::vector< std::string > getDeclaredPropertyNames () const noexcept=0
 Get the list of managed property names. More...
 
virtual PropertygetPointerToProperty (const std::string &name) const =0
 Get a pointer to property by name. More...
 
virtual const std::vector< Property * > & getProperties () const =0
 Get the list of managed properties. More...
 
std::vector< Property * > getPropertiesInGroup (const std::string &group) const
 Get the list of managed properties in a given group. More...
 
virtual TypedValue getProperty (const std::string &name) const =0
 Get the value of a property. More...
 
virtual std::string getPropertyValue (const std::string &name) const =0
 Get the value of a property as a string. More...
 
virtual size_t propertyCount () const =0
 Returns the number of properties under management. More...
 
virtual void removeProperty (const std::string &name, const bool delproperty=true)=0
 Removes the property from management. More...
 
virtual void resetProperties ()=0
 
virtual void setProperties (const ::Json::Value &jsonValue, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >(), bool createMissing=false)=0
 Sets all the properties from a json object. More...
 
virtual void setProperties (const std::string &propertiesJson, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >(), bool createMissing=false)=0
 Sets all properties from a string. More...
 
virtual void setPropertiesWithString (const std::string &propertiesString, const std::unordered_set< std::string > &ignoreProperties=std::unordered_set< std::string >())=0
 Sets all the declared properties from a string. More...
 
IPropertyManagersetProperty (const std::string &name, const char *value)
 Specialised version of setProperty template method to handle const char *. More...
 
IPropertyManagersetProperty (const std::string &name, const std::string &value)
 Specialised version of setProperty template method to handle std::string. More...
 
template<typename T >
IPropertyManagersetProperty (const std::string &name, const T &value)
 Templated method to set the value of a PropertyWithValue. More...
 
template<typename T >
IPropertyManagersetProperty (const std::string &name, std::unique_ptr< T > value)
 Templated method to set the value of a PropertyWithValue from a std::unique_ptr. More...
 
void setPropertyGroup (const std::string &name, const std::string &group)
 Set the group for a given property. More...
 
virtual void setPropertyOrdinal (const int &index, const std::string &value)=0
 Set the value of a property by an index. More...
 
void setPropertySettings (const std::string &name, std::unique_ptr< IPropertySettings > settings)
 
virtual void setPropertyValue (const std::string &name, const std::string &value)=0
 Sets property value from a string. More...
 
virtual void setPropertyValueFromJson (const std::string &name, const Json::Value &value)=0
 Sets property value from a Json::Value. More...
 
virtual void splitByTime (std::vector< SplittingInterval > &, std::vector< PropertyManager * >) const =0
 
virtual std::unique_ptr< PropertytakeProperty (const size_t index)=0
 Removes the property from management and returns a pointer to it. More...
 
void updatePropertyValues (const IPropertyManager &other)
 Update values of the existing properties. More...
 
virtual bool validateProperties () const =0
 Validates all the properties in the collection. More...
 
virtual ~IPropertyManager ()=default
 

Protected Member Functions

Parallel::ExecutionMode getParallelExecutionMode (const std::map< std::string, Parallel::StorageMode > &storageModes) const override
 Get correct execution mode based on input storage modes for an MPI run. More...
 
- Protected Member Functions inherited from Mantid::API::Algorithm
void exec (Parallel::ExecutionMode executionMode)
 Runs the algorithm with the specified execution mode. More...
 
virtual void execDistributed ()
 Runs the algorithm in distributed execution mode. More...
 
virtual void execMasterOnly ()
 Runs the algorithm in master-only execution mode. More...
 
virtual const std::string workspaceMethodOnTypes () const
 Returns a semi-colon separated list of workspace types to attach this algorithm. More...
 
void cacheWorkspaceProperties ()
 Go through the properties and cache the input/output workspace properties for later use. More...
 
void cacheInputWorkspaceHistories ()
 Cache the histories of any input workspaces so they can be copied over after algorithm completion. More...
 
void setExecutionState (const ExecutionState state)
 Sets the current execution state. More...
 
void setResultState (const ResultState state)
 Sets the result execution state. More...
 
void store ()
 Stores any output workspaces into the AnalysisDataService. More...
 
void progress (double p, const std::string &msg="", double estimatedTime=0.0, int progressPrecision=0)
 Sends ProgressNotification. More...
 
void interruption_point ()
 This is called during long-running operations, and check if the algorithm has requested that it be cancelled. More...
 
Poco::NotificationCenter & notificationCenter () const
 Return a reference to the algorithm's notification dispatcher. More...
 
void handleChildProgressNotification (const Poco::AutoPtr< ProgressNotification > &pNf)
 Observation slot for child algorithm progress notification messages, these are scaled and then signalled for this algorithm. More...
 
const Poco::AbstractObserver & progressObserver () const
 Return a reference to the algorithm's object that is reporting progress. More...
 
bool isWorkspaceProperty (const Kernel::Property *const prop) const
 checks the property is a workspace property More...
 
bool trackingHistory ()
 get whether we are tracking the history for this algorithm, More...
 
virtual void fillHistory ()
 Copy workspace history for input workspaces to output workspaces and record the history for ths algorithm. More...
 
virtual void setOtherProperties (IAlgorithm *alg, const std::string &propertyName, const std::string &propertyValue, int periodNum)
 Virtual method to set the non workspace properties for this algorithm. More...
 
template<typename T , const int AllowedIndexTypes = static_cast<int>(IndexType::WorkspaceIndex), typename... WSPropArgs, typename = typename std::enable_if<std::is_convertible<T *, MatrixWorkspace *>::value>::type>
void declareWorkspaceInputProperties (const std::string &propertyName, const std::string &doc, WSPropArgs &&...wsPropArgs)
 
- Protected Member Functions inherited from Mantid::Kernel::IPropertyManager
virtual void afterPropertySet (const std::string &)
 Override this method to perform a custom action right after a property was set. More...
 
virtual void clear ()=0
 Clears all properties under management. More...
 
virtual PropertygetPointerToPropertyOrdinal (const int &index) const =0
 Get a property by an index. More...
 
template<typename T >
getValue (const std::string &name) const
 Templated method to get the value of a property. More...
 
template<>
MANTID_KERNEL_DLL PropertyManager_sptr getValue (const std::string &name) const
 
template<>
MANTID_KERNEL_DLL PropertyManager_const_sptr getValue (const std::string &name) const
 

Private Member Functions

void addWaveAdj (const double *c, const double *Dc, HistogramData::HistogramY::iterator bInOut, HistogramData::HistogramY::iterator e2InOut) const
 Calculates the contribution to the normalization terms from each bin in a spectrum. More...
 
void addWaveAdj (const double *c, const double *Dc, HistogramData::HistogramY::iterator bInOut, HistogramData::HistogramY::iterator e2InOut, HistogramData::HistogramY::const_iterator wavePixelAdjData, HistogramData::HistogramE::const_iterator wavePixelAdjError) const
 Calculates the contribution to the normalization terms from each bin in a spectrum. More...
 
void calculateNormalization (const size_t wavStart, const size_t wsIndex, const API::MatrixWorkspace_const_sptr &pixelAdj, const API::MatrixWorkspace_const_sptr &wavePixelAdj, double const *const binNorms, double const *const binNormEs, HistogramData::HistogramY::iterator norm, HistogramData::HistogramY::iterator normETo2) const
 Calculate the normalization term for each output bin. More...
 
void convertWavetoQ (const API::SpectrumInfo &spectrumInfo, const size_t wsInd, const bool doGravity, const size_t offset, HistogramData::HistogramY::iterator Qs, const double extraLength) const
 Fills a vector with the Q values calculated from the wavelength bin centers from the input workspace and the workspace geometry as Q = 4*pi*sin(theta)/lambda. More...
 
void exec () override
 Execution code. More...
 
void getQBinPlus1 (const HistogramData::HistogramX &OutQs, const double QToFind, HistogramData::HistogramY::const_iterator &loc) const
 This is a slightly "clever" method as it makes some guesses about where is best to look for the right Q bin based on the fact that the input Qs (calcualted from wavelengths) tend to go down while the output Qs are always in accending order. More...
 
void init () override
 Initialisation code. More...
 
void normalize (const HistogramData::HistogramY &normSum, const HistogramData::HistogramE &normError2, HistogramData::HistogramY &counts, HistogramData::HistogramE &errors) const
 Divides the number of counts in each output Q bin by the wrighting ("number that would expected to arrive") The errors are propogated using the uncorrolated error estimate for multiplication/division. More...
 
void normToMask (const size_t offSet, const size_t wsIndex, const HistogramData::HistogramY::iterator theNorms, const HistogramData::HistogramY::iterator errorSquared) const
 Scaled to bin masking, to the normalization. More...
 
void pixelWeight (const API::MatrixWorkspace_const_sptr &pixelAdj, const size_t wsIndex, double &weight, double &error) const
 Calculates the normalisation for the spectrum specified by the index number that was passed as the solid angle multiplied by the pixelAdj that was passed. More...
 
API::MatrixWorkspace_sptr setUpOutputWorkspace (const std::vector< double > &binParams) const
 Creates the output workspace, its size, units, etc. More...
 

Private Attributes

API::MatrixWorkspace_const_sptr m_dataWS
 the experimental workspace with counts across the detector More...
 
bool m_doSolidAngle
 

Additional Inherited Members

- Public Types inherited from Mantid::API::Algorithm
using WorkspaceVector = std::vector< std::shared_ptr< Workspace > >
 
- Static Public Member Functions inherited from Mantid::API::Algorithm
static IAlgorithm_sptr fromString (const std::string &input)
 De-serialize an object from a string. More...
 
static IAlgorithm_sptr fromJson (const Json::Value &input)
 De-serialize an object from a Json. More...
 
static IAlgorithm_sptr fromHistory (const AlgorithmHistory &history)
 Construct an object from a history entry. More...
 
- Public Attributes inherited from Mantid::API::Algorithm
bool calledByAlias = false
 Flag to indicate if the algorithm is called by its alias. More...
 
- Static Protected Member Functions inherited from Mantid::API::Algorithm
template<typename NumT >
static bool isEmpty (const NumT toCheck)
 checks that the value was not set by users, uses the value in empty double/int. More...
 
- Protected Attributes inherited from Mantid::API::Algorithm
std::atomic< bool > m_cancel
 Set to true to stop execution. More...
 
std::atomic< bool > m_parallelException
 Set if an exception is thrown, and not caught, within a parallel region. More...
 
std::vector< IWorkspaceProperty * > m_inputWorkspaceProps
 All the WorkspaceProperties that are Input or InOut. Set in execute() More...
 
std::shared_ptr< AlgorithmHistorym_history
 Pointer to the history for the algorithm being executed. More...
 
Kernel::Logger m_log
 Logger for this algorithm. More...
 
Kernel::Loggerg_log
 
std::shared_ptr< AlgorithmHistorym_parentHistory
 Pointer to the parent history object (if set) More...
 
std::vector< WorkspaceVectorm_unrolledInputWorkspaces
 One vector of workspaces for each input workspace property. More...
 
size_t m_groupSize
 Size of the group(s) being processed. More...
 
bool m_usingBaseProcessGroups = false
 distinguish between base processGroups() and overriden/algorithm specific versions More...
 
- Static Protected Attributes inherited from Mantid::API::Algorithm
static size_t g_execCount = 0
 Counter to keep track of algorithm execution order. More...
 

Detailed Description

Takes account of the effects of gravity for instruments where the y-axis points upwards, for example SANS instruments.

Author
Steve Williams ISIS Rutherford Appleton Laboratory
Date
10/12/2010

Definition at line 26 of file Q1D2.h.

Constructor & Destructor Documentation

◆ Q1D2()

Mantid::Algorithms::Q1D2::Q1D2 ( )

Default constructor.

Definition at line 45 of file Q1D2.cpp.

Member Function Documentation

◆ addWaveAdj() [1/2]

void Mantid::Algorithms::Q1D2::addWaveAdj ( const double *  c,
const double *  Dc,
HistogramData::HistogramY::iterator  bInOut,
HistogramData::HistogramY::iterator  e2InOut 
) const
private

Calculates the contribution to the normalization terms from each bin in a spectrum.

Parameters
[in]cpointer to the start of a contigious array of wavelength dependent normalization terms
[in]Dcpointer to the start of a contigious array that corrosponds to wavelength dependent term, having its error
[in,out]bInOutnormalization for each bin, this method multiplise this by the proportion that is not masked and the normalization workspace
[in,out]e2InOutthis array must follow straight after the normalization array and will contain the error on the normalisation term before the WavelengthAdj term

Definition at line 455 of file Q1D2.cpp.

Referenced by calculateNormalization().

◆ addWaveAdj() [2/2]

void Mantid::Algorithms::Q1D2::addWaveAdj ( const double *  c,
const double *  Dc,
HistogramData::HistogramY::iterator  bInOut,
HistogramData::HistogramY::iterator  e2InOut,
HistogramData::HistogramY::const_iterator  wavePixelAdjData,
HistogramData::HistogramE::const_iterator  wavePixelAdjError 
) const
private

Calculates the contribution to the normalization terms from each bin in a spectrum.

Parameters
[in]cpointer to the start of a contigious array of wavelength dependent normalization terms
[in]Dcpointer to the start of a contigious array that corrosponds to wavelength dependent term, having its error
[in,out]bInOutnormalization for each bin, this method multiplise this by the proportion that is not masked and the normalization workspace
[in,out]e2InOutthis array must follow straight after the normalization array and will contain the error on the normalisation term before the WavelengthAdj term
[in]wavePixelAdjDatanormalization correction for each bin for each detector pixel.
[in]wavePixelAdjErrornormalization correction incertainty for each bin for each detector pixel.

Definition at line 492 of file Q1D2.cpp.

◆ calculateNormalization()

void Mantid::Algorithms::Q1D2::calculateNormalization ( const size_t  wavStart,
const size_t  wsIndex,
const API::MatrixWorkspace_const_sptr pixelAdj,
const API::MatrixWorkspace_const_sptr wavePixelAdj,
double const *const  binNorms,
double const *const  binNormEs,
HistogramData::HistogramY::iterator  norm,
HistogramData::HistogramY::iterator  normETo2 
) const
private

Calculate the normalization term for each output bin.

Parameters
wavStart[in] the index number of the first bin in the input wavelengths that is actually being used
wsIndex[in] the ws index of the spectrum to calculate
pixelAdj[in] if not NULL this is workspace contains single bins with the adjustments, e.g. detector efficencies, for the given ws index
wavePixelAdj[in] if not NULL this is workspace that contains the adjustments for the pixels and wavelenght dependend values.
binNorms[in] pointer to a contigious array of doubles that are the wavelength correction from waveAdj workspace, can be NULL
binNormEs[in] pointer to a contigious array of doubles which corrospond to the corrections and are their errors, can be NULL
norm[out] normalization for each bin, including soild angle, pixel correction, the proportion that is not masked and the normalization workspace
normETo2[out] this pointer must point to the end of the norm array, it will be filled with the total of the error on the normalization

Definition at line 381 of file Q1D2.cpp.

References addWaveAdj(), n, normToMask(), and pixelWeight().

Referenced by exec().

◆ category()

const std::string Mantid::Algorithms::Q1D2::category ( ) const
inlineoverridevirtual

Algorithm's category for identification.

Implements Mantid::API::IAlgorithm.

Definition at line 42 of file Q1D2.h.

◆ convertWavetoQ()

void Mantid::Algorithms::Q1D2::convertWavetoQ ( const API::SpectrumInfo spectrumInfo,
const size_t  wsInd,
const bool  doGravity,
const size_t  offset,
HistogramData::HistogramY::iterator  Qs,
const double  extraLength 
) const
private

Fills a vector with the Q values calculated from the wavelength bin centers from the input workspace and the workspace geometry as Q = 4*pi*sin(theta)/lambda.

Parameters
[in]spectrumInfoSpectrumInfo for workspace
[in]wsIndthe spectrum to calculate
[in]doGravityif to include gravity in the calculation of Q
[in]offsetindex number of the first input bin to use
[in]extraLengthfor gravitational correction
[out]Qspoints to a preallocated array that is large enough to contain all the calculated Q values
Exceptions
NotFoundErrorif the detector associated with the spectrum is not found in the instrument definition

Definition at line 574 of file Q1D2.cpp.

References Mantid::Algorithms::GravitySANSHelper::calcSinTheta(), lambda, m_dataWS, and Mantid::API::SpectrumInfo::twoTheta().

Referenced by exec().

◆ exec()

void Mantid::Algorithms::Q1D2::exec ( )
overrideprivatevirtual

◆ getParallelExecutionMode()

Parallel::ExecutionMode Mantid::Algorithms::Q1D2::getParallelExecutionMode ( const std::map< std::string, Parallel::StorageMode > &  storageModes) const
overrideprotectedvirtual

Get correct execution mode based on input storage modes for an MPI run.

The default implementation returns ExecutionMode::Invalid. Classes inheriting from Algorithm can re-implement this if they support execution with multiple MPI ranks. May not return ExecutionMode::Serial, because that is not a "parallel" execution mode.

Reimplemented from Mantid::API::Algorithm.

Definition at line 679 of file Q1D2.cpp.

References name().

◆ getQBinPlus1()

void Mantid::Algorithms::Q1D2::getQBinPlus1 ( const HistogramData::HistogramX &  OutQs,
const double  QToFind,
HistogramData::HistogramY::const_iterator &  loc 
) const
private

This is a slightly "clever" method as it makes some guesses about where is best to look for the right Q bin based on the fact that the input Qs (calcualted from wavelengths) tend to go down while the output Qs are always in accending order.

Parameters
[in]OutQsthe array of output Q bin boundaries, this finds the bin that contains the QIn value
[in]QToFindthe Q value to find the correct bin for
[in,out]locpoints to the bin boundary (in the OutQs array) whos Q is higher than QToFind and higher by the smallest amount. Algorithm starts by checking the value of loc passed and then all the bins downwards through the array

Definition at line 618 of file Q1D2.cpp.

Referenced by exec().

◆ init()

void Mantid::Algorithms::Q1D2::init ( )
overrideprivatevirtual

◆ name()

const std::string Mantid::Algorithms::Q1D2::name ( ) const
inlineoverridevirtual

Algorithm's name.

Implements Mantid::API::Algorithm.

Definition at line 31 of file Q1D2.h.

Referenced by getParallelExecutionMode().

◆ normalize()

void Mantid::Algorithms::Q1D2::normalize ( const HistogramData::HistogramY &  normSum,
const HistogramData::HistogramE &  normError2,
HistogramData::HistogramY &  counts,
HistogramData::HistogramE &  errors 
) const
private

Divides the number of counts in each output Q bin by the wrighting ("number that would expected to arrive") The errors are propogated using the uncorrolated error estimate for multiplication/division.

Parameters
[in]normSumthe weighting for each bin
[in]normError2square of the error on the normalization
[in,out]countscounts in each bin
[in,out]errorsinput the square of the error on each bin, output the total error (unsquared)

Definition at line 654 of file Q1D2.cpp.

Referenced by exec().

◆ normToMask()

void Mantid::Algorithms::Q1D2::normToMask ( const size_t  offSet,
const size_t  wsIndex,
const HistogramData::HistogramY::iterator  theNorms,
const HistogramData::HistogramY::iterator  errorSquared 
) const
private

Scaled to bin masking, to the normalization.

Parameters
[in]offSetthe index number of the first bin in the input wavelengths that is actually being used
[in]wsIndexthe spectrum to calculate
[in,out]theNormsnormalization for each bin, this is multiplied by the proportion that is not masked and the normalization workspace
[in,out]errorSquaredthe running total of the square of the uncertainty in the normalization

Definition at line 537 of file Q1D2.cpp.

References m_dataWS.

Referenced by calculateNormalization().

◆ pixelWeight()

void Mantid::Algorithms::Q1D2::pixelWeight ( const API::MatrixWorkspace_const_sptr pixelAdj,
const size_t  wsIndex,
double &  weight,
double &  error 
) const
private

Calculates the normalisation for the spectrum specified by the index number that was passed as the solid angle multiplied by the pixelAdj that was passed.

Parameters
[in]pixelAdjif not NULL this is workspace contains single bins with the adjustments, e.g. detector efficiencies, for the given ws index
[in]wsIndexthe workspace index to return the data from
[out]weightthe solid angle or if pixelAdj the solid angle times the pixel adjustment for this spectrum
[out]errorthe error on the weight, only non-zero if pixelAdj
Exceptions
LogicErrorif the solid angle is tiny or negative

Definition at line 416 of file Q1D2.cpp.

References error, index, m_dataWS, and m_doSolidAngle.

Referenced by calculateNormalization().

◆ seeAlso()

const std::vector< std::string > Mantid::Algorithms::Q1D2::seeAlso ( ) const
inlineoverridevirtual

Function to return all of the seeAlso algorithms related to this algorithm.

Implements Mantid::API::IAlgorithm.

Definition at line 40 of file Q1D2.h.

◆ setUpOutputWorkspace()

API::MatrixWorkspace_sptr Mantid::Algorithms::Q1D2::setUpOutputWorkspace ( const std::vector< double > &  binParams) const
private

Creates the output workspace, its size, units, etc.

Parameters
binParamsthe bin boundary specification using the same same syntax as param the Rebin algorithm
Returns
A pointer to the newly-created workspace

Definition at line 342 of file Q1D2.cpp.

References Mantid::API::Algorithm::communicator(), Mantid::Kernel::VectorHelper::createAxisFromRebinParams(), Mantid::Kernel::SingletonHolder< T >::Instance(), and m_dataWS.

Referenced by exec().

◆ summary()

const std::string Mantid::Algorithms::Q1D2::summary ( ) const
inlineoverridevirtual

Summary of algorithms purpose.

Implements Mantid::API::Algorithm.

Definition at line 33 of file Q1D2.h.

◆ version()

int Mantid::Algorithms::Q1D2::version ( ) const
inlineoverridevirtual

Algorithm's version.

Implements Mantid::API::Algorithm.

Definition at line 39 of file Q1D2.h.

Member Data Documentation

◆ m_dataWS

API::MatrixWorkspace_const_sptr Mantid::Algorithms::Q1D2::m_dataWS
private

the experimental workspace with counts across the detector

Definition at line 50 of file Q1D2.h.

Referenced by convertWavetoQ(), exec(), normToMask(), pixelWeight(), and setUpOutputWorkspace().

◆ m_doSolidAngle

bool Mantid::Algorithms::Q1D2::m_doSolidAngle
private

Definition at line 51 of file Q1D2.h.

Referenced by exec(), and pixelWeight().


The documentation for this class was generated from the following files: