IndexPeaks.cpp File Reference

#include "MantidCrystal/IndexPeaks.h"
#include "MantidAPI/IPeaksWorkspace.h"
#include "MantidAPI/Sample.h"
#include "MantidCrystal/PeakAlgorithmHelpers.h"
#include "MantidDataObjects/LeanElasticPeaksWorkspace.h"
#include "MantidDataObjects/PeaksWorkspace.h"
#include "MantidGeometry/Crystal/IndexingUtils.h"
#include "MantidGeometry/Crystal/OrientedLattice.h"
#include "MantidKernel/ArrayLengthValidator.h"
#include "MantidKernel/ArrayProperty.h"
#include "MantidKernel/BoundedValidator.h"
#include <boost/optional/optional.hpp>
#include <algorithm>

Go to the source code of this file.

Namespaces
namespace	Mantid
	Helper class which provides the Collimation Length for SANS instruments.
namespace	Mantid::Crystal
namespace	Mantid::Crystal::Prop

Variable Documentation

commonUB

const bool commonUB

Definition at line 117 of file IndexPeaks.cpp.

Referenced by Mantid::Crystal::FindUBUsingIndexedPeaks::exec().

crossTerms

const bool crossTerms

Definition at line 57 of file IndexPeaks.cpp.

Referenced by Mantid::Crystal::OptimizeLatticeForCellType::exec(), Mantid::Crystal::PredictSatellitePeaks::exec(), Mantid::Crystal::PredictSatellitePeaks::exec_peaks(), Mantid::Crystal::generateOffsetVectors(), and Mantid::Crystal::PredictFractionalPeaks::getModulationInfo().

error

double error {0.0}

Definition at line 133 of file IndexPeaks.cpp.

Referenced by Mantid::DataObjects::MDHistoWorkspace::add(), Mantid::Kernel::DataService< T >::add(), Mantid::MDAlgorithms::LoadSQW2::addEventFromBuffer(), Mantid::MDAlgorithms::ImportMDEventWorkspace::addEventsData(), Mantid::DataHandling::LoadMuonNexus1::addGoodFrames(), Mantid::Kernel::AttenuationProfile::AttenuationProfile(), Mantid::DataHandling::SaveSESANS::calculateError(), Mantid::Algorithms::GetEi2::calculatePeakWidthAtHalfHeight(), Mantid::Kernel::CompositeValidator::checkAll(), Mantid::Kernel::DataService< T >::checkForEmptyName(), Mantid::Kernel::DataService< T >::checkForNullPointer(), Mantid::CurveFitting::Algorithms::SplineSmoothing::checkSmoothingAccuracy(), Mantid::Geometry::BoundingBox::checkValid(), Mantid::Kernel::DateTimeValidator::checkValidity(), Mantid::Kernel::FileValidator::checkValidity(), Mantid::Kernel::StringContainsValidator::checkValidity(), Mantid::Kernel::MultiFileValidator::checkValidity(), Mantid::Kernel::ArrayBoundedValidator< TYPE >::checkValidity(), Mantid::Kernel::ArrayOrderedPairsValidator< TYPE >::checkValidity(), Mantid::Kernel::BoundedValidator< TYPE >::checkValidity(), MantidQt::CustomInterfaces::UserInputValidator::checkWorkspaceGroupIsValid(), Mantid::API::IFunction::clone(), Mantid::MDAlgorithms::ConvertCWSDExpToMomentum::convertSpiceMatrixToMomentumMDEvents(), WorkspaceCreationHelper::create1DWorkspaceConstant(), WorkspaceCreationHelper::create1DWorkspaceConstantWithXerror(), Mantid::MDAlgorithms::ConvertSpiceDataToRealSpace::createDataMDWorkspace(), Mantid::CurveFitting::FitMW::createDomain(), Mantid::CurveFitting::HistogramDomainCreator::createDomain(), Mantid::CurveFitting::TableWorkspaceDomainCreator::createDomain(), MantidQt::API::FindFilesWorker::createFindFilesSearchResult(), MantidQt::API::UserSubWindowFactoryImpl::createFromAlias(), Mantid::DataObjects::EventList::createFromHistogram(), Mantid::MDAlgorithms::ConvertCWSDMDtoHKL::createHKLMDWorkspace(), Mantid::MDAlgorithms::ConvertSpiceDataToRealSpace::createMonitorMDWorkspace(), Mantid::DataHandling::LoadSpiceAscii::createRunInfoWS(), Mantid::DataHandling::LoadHFIRSANS::createWorkspace(), Mantid::DataHandling::LoadSpice2D::createWorkspace(), WorkspaceCreationHelper::createWorkspaceSingleValueWithError(), Mantid::DataObjects::EventList::divide(), Mantid::DataObjects::MDHistoWorkspace::divide(), Mantid::DataObjects::EventList::divideHistogramHelper(), Mantid::Algorithms::MedianDetectorTest::doDetectorTests(), Mantid::ICat::CatalogDownloadDataFiles::doDownloadandSavetoLocalDrive(), MantidQt::MantidWidgets::MantidTreeWidget::dropEvent(), Mantid::API::IFunction::ValidatorEvaluator::evaluate(), Mantid::Algorithms::AverageLogData::exec(), Mantid::Algorithms::MaxEnt::exec(), Mantid::Algorithms::PDFFourierTransform::exec(), Mantid::Algorithms::PDFFourierTransform2::exec(), Mantid::Algorithms::ResampleX::exec(), Mantid::Crystal::FindUBUsingFFT::exec(), Mantid::Crystal::FindUBUsingLatticeParameters::exec(), Mantid::Crystal::FindUBUsingMinMaxD::exec(), Mantid::DataHandling::LoadNXSPE::exec(), Mantid::DataHandling::SaveGDA::exec(), Mantid::DataHandling::SaveSESANS::exec(), Mantid::DataHandling::SaveTBL::exec(), Mantid::MDAlgorithms::ImportMDHistoWorkspace::exec(), Mantid::MDAlgorithms::TransposeMD::exec(), Mantid::WorkflowAlgorithms::EQSANSPatchSensitivity::exec(), Mantid::API::Algorithm::executeInternal(), Mantid::DataObjects::ReflectometryTransform::executeNormPoly(), export_Logger(), Mantid::MDAlgorithms::LoadDNSSCD::fillOutputWorkspace(), Mantid::MDAlgorithms::LoadDNSSCD::fillOutputWorkspaceRaw(), Mantid::Kernel::NearestNeighbours< N >::findNearest(), Mantid::API::FileFinderImpl::findRuns(), Mantid::Kernel::TimeSeriesProperty< TYPE >::firstTime(), Mantid::Kernel::TimeSeriesProperty< TYPE >::firstValue(), Mantid::Crystal::IntegratePeakTimeSlices::Fit(), fixupURL(), Mantid::MDAlgorithms::SmoothMD::gaussianSmooth(), Mantid::Algorithms::generateErrorString(), Mantid::Algorithms::FilterEvents::generateSplitterTSP(), Mantid::Algorithms::FitPeak::genOutputTableWS(), Mantid::Geometry::ScalarUtils::GetCellBestError(), Mantid::Geometry::ScalarUtils::GetCellForForm(), Mantid::API::Algorithm::getExecutionMode(), MantidQt::MantidWidgets::SequentialFitDialog::getFitResults(), Mantid::Geometry::IndexingUtils::GetIndexedPeaks(), Mantid::Geometry::IndexingUtils::GetIndexedPeaks_1D(), Mantid::Kernel::TimeSeriesProperty< TYPE >::getSingleValue(), MantidQt::MantidWidgets::DataSelector::handleAutoLoadComplete(), Mantid::MDAlgorithms::SmoothMD::hatSmooth(), MantidQt::API::AlgorithmPropertiesWidget::hideOrDisableProperties(), MantidQt::API::AlgorithmPropertiesWidget::initLayout(), Mantid::DataObjects::EventList::integrate(), Mantid::MDAlgorithms::IntegratePeaksMD::integrate(), Mantid::MDAlgorithms::IntegratePeaksMD2::integrate(), Mantid::API::PeakFunctionIntegrator::integrateError(), Mantid::DataObjects::EventList::integrateHelper(), Mantid::API::IndexProperty::isValid(), Mantid::API::AnalysisDataServiceImpl::isValid(), Mantid::CurveFitting::FuncMinimisers::LevenbergMarquardtMDMinimizer::iterate(), Mantid::Kernel::TimeSeriesProperty< TYPE >::lastTime(), Mantid::Kernel::TimeSeriesProperty< TYPE >::lastValue(), Mantid::Algorithms::VesuvioL1ThetaResolution::loadInstrument(), Mantid::DataHandling::LoadILLSALSA::loadNexusV1(), Mantid::DataHandling::LoadILLSALSA::loadNexusV2(), Mantid::MDAlgorithms::ConvertMDHistoToMatrixWorkspace::make2DWorkspace(), Mantid::DataObjects::EventList::multiply(), Mantid::DataObjects::MDHistoWorkspace::multiply(), Mantid::DataObjects::EventList::multiplyHelper(), Mantid::DataObjects::EventList::multiplyHistogramHelper(), Mantid::Algorithms::CalculateEfficiency::normalizeDetectors(), Mantid::Kernel::TimeSeriesProperty< TYPE >::nthInterval(), Mantid::Kernel::TimeSeriesProperty< TYPE >::nthTime(), Mantid::Kernel::TimeSeriesProperty< TYPE >::nthValue(), Mantid::Geometry::IndexingUtils::NumberIndexed_1D(), Mantid::DataHandling::SaveGSS::openFileStream(), Mantid::Algorithms::DirectILLTubeBackground::peakExcludingAverage(), Mantid::PythonInterface::performBinaryOp(), Mantid::Algorithms::SumOverlappingTubes::performBinning(), performWeightedSum(), Mantid::Algorithms::Q1D2::pixelWeight(), Mantid::DataHandling::GroupDetectors2::processFile(), Mantid::ICat::CatalogPublish::publish(), Mantid::DataObjects::FractionalRebinning::rebinToFractionalOutput(), Mantid::Kernel::DataService< T >::rename(), MantidQt::API::FindFilesWorker::run(), SANSInstrumentCreationHelper::runLoadMappingTable(), Mantid::Geometry::IndexingUtils::ScanFor_Directions(), Mantid::Geometry::IndexingUtils::ScanFor_UB(), Mantid::Geometry::IndexingUtils::SelectDirection(), Mantid::Crystal::SCDPanelErrors::setAttribute(), Mantid::CurveFitting::Functions::TabulatedFunction::setAttribute(), MantidQt::MantidWidgets::MantidWSIndexWidget::QLineEditWithErrorMark::setError(), MantidQt::API::PropertyWidget::setError(), MantidQt::MantidWidgets::FunctionBrowser::setLocalParameterValue(), MantidQt::MantidWidgets::FunctionMultiDomainPresenter::setLocalParameterValue(), MantidQt::MantidWidgets::FunctionModel::setLocalParameterValue(), MantidQt::MantidWidgets::FunctionBrowser::setParameterError(), MantidQt::MantidWidgets::FunctionTreeView::setParameterError(), MantidQt::API::AlgorithmDialog::setPropertyValue(), MantidQt::API::AlgorithmDialog::setPropertyValues(), Mantid::Kernel::IPropertyManager::setTypedProperty(), Mantid::DataObjects::MDHistoWorkspace::setUsingMask(), Mantid::DataObjects::SpecialWorkspace2D::setValue(), Mantid::API::FileProperty::setValue(), Mantid::API::MultipleFileProperty::setValue(), Mantid::API::FunctionProperty::setValue(), Mantid::API::MultipleFileProperty::setValueAsMultipleFiles(), Mantid::API::MultipleFileProperty::setValueAsSingleFile(), MantidQt::MantidWidgets::CatalogSearch::showErrorLabels(), MantidQt::API::AlgorithmDialog::showValidators(), ICat4::soap_new_set_ns1__parameter(), MantidQt::MantidWidgets::splitConstraintString(), Mantid::DataHandling::store_value(), Mantid::DataHandling::LoadHFIRSANS::storeValue(), Mantid::DataObjects::MDHistoWorkspace::subtract(), Mantid::Algorithms::CalculateEfficiency::sumUnmaskedDetectors(), Mantid::ICat::ICat4Catalog::throwErrorMessage(), Mantid::API::Expression::tokenize(), MantidQt::MantidWidgets::PropertyHandler::updateError(), MantidQt::API::PropertyWidget::updateIconVisibility(), ScriptEditor::updateProgressMarker(), ScriptEditor::updateProgressMarkerFromThread(), Mantid::Algorithms::EditInstrumentGeometry::validateInputs(), Mantid::DataHandling::SetSample::validateMaterial(), Mantid::Kernel::PropertyManager::validateProperties(), Mantid::Geometry::SymmetryOperationSymbolParser::verifyMatrix(), Mantid::API::AnalysisDataServiceImpl::verifyName(), Mantid::DataObjects::WorkspaceSingleValue::WorkspaceSingleValue(), and Mantid::DataHandling::SaveGSS::writeBufferToFile().

main

PeakIndexingStats main

Definition at line 164 of file IndexPeaks.cpp.

Referenced by Mantid::PythonInterface::RunPythonScript::doExecuteScript().

mainTolerance

const double mainTolerance

Definition at line 115 of file IndexPeaks.cpp.

maxOrder

const int maxOrder

Definition at line 55 of file IndexPeaks.cpp.

Referenced by Mantid::Crystal::FindUBUsingIndexedPeaks::exec(), Mantid::Crystal::OptimizeLatticeForCellType::exec(), Mantid::Crystal::PredictSatellitePeaks::exec(), Mantid::MDAlgorithms::IntegrateEllipsoidsV1::exec(), Mantid::Crystal::PredictSatellitePeaks::exec_peaks(), Mantid::Crystal::generateOffsetVectors(), Mantid::Crystal::PredictFractionalPeaks::getModulationInfo(), Mantid::Crystal::PredictSatellitePeaks::predictOffsets(), Mantid::Crystal::PredictSatellitePeaks::predictOffsetsWithCrossTerms(), and Mantid::Crystal::PredictFractionalPeaks::validateInputs().

modVectors

const std::vector<V3D> modVectors

Definition at line 56 of file IndexPeaks.cpp.

Referenced by Mantid::Crystal::addModulationVectors(), Mantid::Crystal::generateOffsetVectors(), Mantid::Crystal::PredictFractionalPeaks::validateInputs(), and Mantid::Crystal::validModulationVectors().

numIndexed

int numIndexed {0}

Definition at line 132 of file IndexPeaks.cpp.

Referenced by Mantid::Crystal::SCDCalibratePanels::findU().

roundHKLs

const bool roundHKLs

Definition at line 116 of file IndexPeaks.cpp.

satellites

PeakIndexingStats satellites

Definition at line 119 of file IndexPeaks.cpp.

storeModulationInfo

const bool storeModulationInfo

Definition at line 118 of file IndexPeaks.cpp.

tolerance

const double tolerance

Definition at line 54 of file IndexPeaks.cpp.

workspace

IPeaksWorkspace_sptr workspace

Definition at line 114 of file IndexPeaks.cpp.

Referenced by Mantid::API::AnalysisDataServiceImpl::add(), Mantid::CurveFitting::Algorithms::QENSFitSimultaneous::addAdditionalLogs(), Mantid::CurveFitting::Algorithms::QENSFitSequential::addAdditionalLogs(), InstrumentCreationHelper::addFullInstrumentToWorkspace(), Mantid::CurveFitting::Algorithms::addGroupWorkspace(), InstrumentCreationHelper::addInstrumentWithGeographicalDetectorsToWorkspace(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::addMatrixWorkspaceActions(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::addMDWorkspaceActions(), Mantid::API::AnalysisDataServiceImpl::addOrReplace(), Mantid::IndirectFitDataCreationHelper::SetUpADSWithWorkspace::addOrReplace(), Mantid::MDAlgorithms::CreateMD::addSampleLog(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::addTableWorkspaceActions(), Mantid::Algorithms::GroupWorkspaces::addToGroup(), Mantid::API::WorkspaceGroup::addWorkspace(), MantidQt::MantidWidgets::FitScriptGeneratorPresenter::addWorkspace(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::addWorkspaceGroupActions(), MantidQt::MantidWidgets::FitScriptGeneratorPresenter::addWorkspaces(), MantidQt::MantidWidgets::AddWorkspaceDialog::addWorkspacesFromGroup(), Mantid::Algorithms::ConvertUnits::alignBins(), Mantid::DataHandling::LoadMuonNexusV2::applyTimeAxisUnitCorrection(), Mantid::DataHandling::MultiPeriodLoadMuonStrategy::applyTimeZeroCorrection(), Mantid::API::WorkspaceGroup::areNamesSimilar(), Mantid::Algorithms::AnnularRingAbsorption::attachSample(), Mantid::Algorithms::CalculateEfficiency2::averageAndNormalizePixels(), Mantid::CurveFitting::Functions::ChebfunBase::calcA(), Mantid::CurveFitting::Functions::ChebfunBase::calcP(), Mantid::MDAlgorithms::ConvertMDHistoToMatrixWorkspace::calcStride(), Mantid::Algorithms::CalculateIqt::calculateIqt(), Mantid::Algorithms::CalculateDynamicRange::calculateQMinMax(), Mantid::Algorithms::ConvertUnits::calculateRebinParams(), Mantid::Algorithms::DiffractionFocussing::calculateRebinParams(), Mantid::API::MDFrameValidator::checkValidity(), MantidQt::CustomInterfaces::UserInputValidator::checkWorkspaceNumberOfBins(), MantidQt::CustomInterfaces::UserInputValidator::checkWorkspaceNumberOfHistograms(), Mantid::DataHandling::LoadMuonNexusV2::chooseLoaderStrategy(), MantidQt::MantidWidgets::CatalogSearch::clearSearch(), Mantid::DataObjects::SpecialWorkspace2D::cloneEmpty(), Mantid::API::WorkspaceGroup::contains(), Mantid::API::WorkspaceGroup::containsInChildren(), Mantid::API::containsMultipleData(), Mantid::CurveFitting::Algorithms::SplineInterpolation::convertBinnedData(), Mantid::CurveFitting::Algorithms::SplineSmoothing::convertBinnedData(), Mantid::DataHandling::LoadILLPolarizedDiffraction::convertSpectrumAxis(), Mantid::MDAlgorithms::CreateMD::convertToMD(), Mantid::Algorithms::CalculateIqt::convertToPointData(), Mantid::Algorithms::DetectorDiagnostic::convertToRate(), Mantid::Algorithms::DiffractionFocussing::convertUnitsToDSpacing(), Mantid::DataHandling::LoadDaveGrp::convertWorkspaceToHistogram(), Mantid::CurveFitting::Algorithms::QENSFitSequential::copyLogs(), Mantid::CurveFitting::Algorithms::QENSFitSimultaneous::copyLogs(), WorkspaceCreationHelper::create2DWorkspaceWithReflectometryInstrument(), WorkspaceCreationHelper::create2DWorkspaceWithReflectometryInstrumentMultiDetector(), Mantid::CurveFitting::LatticeDomainCreator::createDomainFromPeaksWorkspace(), Mantid::CurveFitting::LatticeDomainCreator::createDomainFromPeakTable(), Mantid::FrameworkTestHelpers::createHistoWS(), WorkspaceCreationHelper::createInstrumentForWorkspaceWithDistances(), Mantid::DataHandling::LoadGSS::createInstrumentGeometry(), Mantid::FrameworkTestHelpers::createREFL_WS(), SANSInstrumentCreationHelper::createSANSInstrumentWorkspace(), Mantid::DataHandling::LoadRawHelper::createWorkspace(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::createWorkspaceContextMenu(), Mantid::IndirectFitDataCreationHelper::createWorkspaceWithBinValues(), Mantid::IndirectFitDataCreationHelper::createWorkspaceWithInstrument(), Mantid::IndirectFitDataCreationHelper::createWorkspaceWithTextAxis(), Mantid::Algorithms::ExtractSpectra::cropRagged(), Mantid::Algorithms::CalculateIqt::cropWorkspace(), Mantid::Algorithms::MaxentTransformFourier::dataToImage(), Mantid::DataHandling::LoadEventNexus::deleteBanks(), Mantid::Algorithms::CalculateCarpenterSampleCorrection::deleteWorkspace(), Mantid::DataObjects::detail::doInitializeFromParent(), Mantid::Algorithms::CalculateDynamicRange::exec(), Mantid::Algorithms::ChopData::exec(), Mantid::Algorithms::ConvertFromDistribution::exec(), Mantid::Algorithms::ConvertToDistribution::exec(), Mantid::Algorithms::EditInstrumentGeometry::exec(), Mantid::Algorithms::HRPDSlabCanAbsorption::exec(), Mantid::Algorithms::RealFFT::exec(), Mantid::CurveFitting::Algorithms::QENSFitSequential::exec(), Mantid::DataHandling::CreateSampleShape::exec(), Mantid::DataHandling::DefineGaugeVolume::exec(), Mantid::DataHandling::ISISJournalGetExperimentRuns::exec(), Mantid::DataHandling::LoadFullprofResolution::exec(), Mantid::DataHandling::LoadGSASInstrumentFile::exec(), Mantid::DataHandling::LoadSPE::exec(), Mantid::DataHandling::SaveNexusGeometry::exec(), Mantid::DataHandling::SaveNXcanSAS::exec(), Mantid::DataHandling::SetSampleMaterial::exec(), Mantid::ICat::CatalogGetDataFiles::exec(), Mantid::ICat::CatalogGetDataSets::exec(), Mantid::ICat::CatalogPublish::exec(), Mantid::ICat::CatalogSearch::exec(), Mantid::MDAlgorithms::CreateMD::exec(), Mantid::DataHandling::SetSample::exec(), Mantid::DataHandling::LoadNexusLogs::execLoader(), Mantid::Algorithms::CalculateIqt::extractFFTSpectrum(), Mantid::CurveFitting::Algorithms::QENSFitSequential::extractMembers(), Mantid::CurveFitting::Functions::FunctionQDepends::extractQValues(), Mantid::Algorithms::GetQsInQENSData::extractQValues(), Mantid::DataObjects::FakeMD::fill(), Mantid::DataHandling::LoadEventNexus::filterDuringPause(), Mantid::DataHandling::LoadEventNexus::filterEventsByTime(), MantidQt::MantidWidgets::WorkspaceTreeWidget::filterWorkspaces(), Mantid::CurveFitting::Algorithms::PlotPeakByLogValue::finaliseOutputWorkspaces(), Mantid::API::MultiPeriodGroupWorker::findMultiPeriodGroups(), Mantid::Algorithms::Stitch1D::findStartEndIndexes(), Mantid::API::Algorithm::findWorkspaces(), Mantid::DataObjects::detail::fixDistributionFlag(), Mantid::Algorithms::SpectrumAlgorithm::for_each(), Mantid::CurveFitting::Functions::Convolution::functionFFTMode(), Mantid::ICat::CatalogPublish::generateWorkspaceHistory(), MantidQt::MantidWidgets::FitPropertyBrowser::getAllowedIndex(), Mantid::Algorithms::ExtractQENSMembers::getAxisLabels(), Mantid::DataHandling::LoadDaveGrp::getData(), Mantid::DataHandling::GroupDetectors2::getGroups(), Mantid::DataHandling::LoadHelper::getInstrumentProperty(), Mantid::Algorithms::CreateUserDefinedBackground::getInterpolator(), Mantid::API::WorkspaceGroup::getItem(), MantidQt::MantidWidgets::MantidTreeWidgetItem::getLastModified(), Mantid::DataHandling::MultiPeriodLoadMuonStrategy::getLoadedDetectors(), MantidQt::MantidWidgets::LogValueFinder::getLogNames(), MantidQt::MantidWidgets::LogValueFinder::getLogValue(), Mantid::API::WorkspaceGroup::getMemorySize(), MantidQt::API::getMissingHKLDimensionIndex(), Mantid::Algorithms::ExtractQENSMembers::getQValues(), Mantid::DataHandling::MultiPeriodLoadMuonStrategy::getTimeZeroTable(), Mantid::Algorithms::Transpose::getVerticalAxis(), Mantid::Algorithms::SpectrumAlgorithm::getWorkspaceIndexSet(), Mantid::CurveFitting::Algorithms::DoublePulseFit::getWorkspaces(), Mantid::CurveFitting::Algorithms::QENSFitSimultaneous::getWorkspaces(), MantidQt::MantidWidgets::AddWorkspaceDialog::getWorkspaces(), Mantid::Crystal::FindSXPeaks::getWorkspaceXAxisUnit(), MantidQt::API::ObserverCallback::handleAdd(), MantidQt::API::ObserverCallback::handleAfterReplace(), MantidQt::API::ObserverCallback::handlePreDelete(), MantidQt::MantidWidgets::WorkspaceSelector::hasValidNumberOfBins(), Mantid::Algorithms::SpectrumAlgorithm::ifEventWorkspaceClearMRU(), Mantid::Algorithms::MaxentTransformFourier::imageToData(), MantidQt::MantidWidgets::MantidTreeModel::importMatrixWorkspace(), Mantid::DataObjects::MDHistoWorkspaceIterator::init(), Mantid::DataObjects::initAngularCaches(), Mantid::Algorithms::SofQWNormalisedPolygon::initAngularCachesNonPSD(), Mantid::Algorithms::SofQWNormalisedPolygon::initAngularCachesPSD(), Mantid::Algorithms::SofQWNormalisedPolygon::initAngularCachesTable(), Mantid::Algorithms::SofQCommon::initCachedValues(), Mantid::Algorithms::SofQWPolygon::initCachedValues(), Mantid::API::IDomainCreator::initFunction(), Mantid::DataHandling::LoadILLPolarizedDiffraction::initStaticWorkspace(), Mantid::Algorithms::SofQWPolygon::initThetaCache(), Mantid::Algorithms::CalculateIqt::integration(), MantidQt::API::isHKLDimensions(), Mantid::API::WorkspaceGroup::isInChildGroup(), Mantid::API::WorkspaceGroup::isInGroup(), Mantid::API::WorkspaceGroup::isMultiperiod(), MantidQt::MantidWidgets::SaveWorkspaces::isValid(), Mantid::API::Algorithm::linkHistoryWithLastChild(), Mantid::Algorithms::PDCalibration::load(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadBankParameters(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadData(), Mantid::DataHandling::LoadCSNSNexus::loadEventData(), Mantid::DataHandling::MultiPeriodLoadMuonStrategy::loadGoodFrames(), Mantid::DataHandling::LoadCSNSNexus::loadHistData(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadInstrument(), Mantid::DataHandling::LoadNexusLogs::loadLogs(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadMetaData(), Mantid::DataHandling::MultiPeriodLoadMuonStrategy::loadMuonLogData(), Mantid::DataHandling::LoadNexusLogs::loadNPeriods(), Mantid::DataHandling::LoadNexusLogs::loadNXLog(), Mantid::DataHandling::LoadMuonNexusV2::loadPeriodInfo(), Mantid::DataHandling::LoadNexusLogs::loadSELog(), Mantid::DataHandling::LoadNexusProcessed::loadTableEntry(), Mantid::DataHandling::LoadNXcanSAS::loadTransmission(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadTwoThetaDetectors(), Mantid::DataHandling::LoadNexusLogs::loadVetoPulses(), Mantid::API::WorkspaceHelpers::makeDistribution(), WorkspaceCreationHelper::maskSpectra(), Mantid::Algorithms::CreatePSDBleedMask::maskTube(), Mantid::DataObjects::MDHistoWorkspaceIterator::MDHistoWorkspaceIterator(), Mantid::DataHandling::LoadILLPolarizedDiffraction::moveTwoTheta(), Mantid::Algorithms::CalculateIqt::normalizedFourierTransform(), Mantid::DataObjects::MDFramesToSpecialCoordinateSystem::operator()(), Mantid::CurveFitting::FuncMinimisers::FABADAMinimizer::outputPDF(), MantidQt::API::PlotAxis::PlotAxis(), MantidQt::MantidWidgets::WorkspaceTreeWidget::populateChildData(), MantidQt::MantidWidgets::CatalogSearch::populateDataFileTable(), MantidQt::MantidWidgets::CatalogSearch::populateResultTable(), MantidQt::MantidWidgets::CatalogSearch::populateTable(), MantidQt::CustomDialogs::CatalogPublishDialog::populateUserInvestigations(), MantidQt::MantidWidgets::WorkspaceTreeWidgetSimple::popupContextMenu(), Mantid::API::WorkspaceGroup::print(), Mantid::DataHandling::SaveNXTomo::processAll(), Mantid::DataHandling::GroupDetectors2::processFile(), Mantid::DataHandling::GroupDetectors2::processGroupingWorkspace(), Mantid::DataHandling::GroupDetectors2::processMatrixWorkspace(), Mantid::DataHandling::GroupDetectors2::processXMLFile(), Mantid::DataHandling::FilterEventsByLogValuePreNexus::procEvents(), Mantid::DataHandling::LoadEventPreNexus2::procEvents(), Mantid::Algorithms::ExtractSpectra::propagateBinMasking(), Mantid::Algorithms::SANSCollimationLengthEstimator::provideCollimationLength(), MantidQt::API::provideSkewMatrix(), Mantid::ICat::CatalogPublish::publishWorkspaceHistory(), Mantid::Algorithms::Integration::rangeFilterEventWorkspace(), Mantid::DataHandling::LoadSPE::readHistogram(), Mantid::Algorithms::UnwrapMonitor::rebin(), Mantid::Algorithms::CalculateIqt::rebin(), Mantid::Algorithms::MergeRuns::rebinInput(), Mantid::Algorithms::DiffractionFocussing::RebinWorkspace(), WorkspaceCreationHelper::reflectometryWorkspace(), Mantid::Algorithms::ConvertUnits::removeUnphysicalBins(), Mantid::API::renameWorkspace(), Mantid::API::renameWorkspacesInQENSFit(), Mantid::Algorithms::CalculateIqt::replaceSpecialValues(), MantidQt::API::requiresSkewMatrix(), Mantid::CurveFitting::Functions::ChebfunBase::roots(), Mantid::Algorithms::AnnularRingAbsorption::runCreateSampleShape(), Mantid::DataHandling::MaskDetectorsInShape::runFindDetectorsInShape(), SANSInstrumentCreationHelper::runLoadInstrument(), SANSInstrumentCreationHelper::runLoadMappingTable(), Mantid::DataHandling::MaskDetectorsInShape::runMaskDetectors(), Mantid::Algorithms::AnnularRingAbsorption::runMonteCarloAbsorptionCorrection(), Mantid::Algorithms::AnnularRingAbsorption::runSetSampleMaterial(), Mantid::ICat::CatalogPublish::saveWorkspaceToNexus(), Mantid::DataHandling::SaveCSV::saveXerrors(), Mantid::MDAlgorithms::CreateMD::setGoniometer(), Mantid::API::IFunction::setMatrixWorkspace(), Mantid::API::CompositeFunction::setMatrixWorkspace(), Mantid::API::IFunctionMW::setMatrixWorkspace(), Mantid::CurveFitting::Functions::Bk2BkExpConvPV::setMatrixWorkspace(), Mantid::CurveFitting::Functions::GramCharlierComptonProfile::setMatrixWorkspace(), Mantid::CurveFitting::Functions::IkedaCarpenterPV::setMatrixWorkspace(), Mantid::CurveFitting::Functions::PawleyFunction::setMatrixWorkspace(), Mantid::CurveFitting::Functions::ComptonProfile::setMatrixWorkspace(), Mantid::CurveFitting::Functions::VesuvioResolution::setMatrixWorkspace(), Mantid::CurveFitting::Functions::FunctionQDepends::setMatrixWorkspace(), Mantid::API::FunctionParameterDecorator::setMatrixWorkspace(), MantidQt::MantidWidgets::ConvolutionFunctionModel::setModel(), Mantid::CurveFitting::Algorithms::setMultiDataProperties(), Mantid::Algorithms::ExtractQENSMembers::setNumericAxis(), Mantid::CurveFitting::SeqDomainSpectrumCreator::setParametersFromPropertyManager(), Mantid::DataHandling::FilterEventsByLogValuePreNexus::setProtonCharge(), Mantid::DataHandling::LoadEventPreNexus2::setProtonCharge(), MantidQt::MantidWidgets::FunctionModel::setResolutionFromWorkspace(), Mantid::DataHandling::CreateSimulationWorkspace::setStartDate(), Mantid::MDAlgorithms::CreateMD::setUB(), Mantid::Algorithms::CalculateCarpenterSampleCorrection::setUncertainties(), Mantid::CurveFitting::Algorithms::NormaliseByPeakArea::setUnitsToMomentum(), Mantid::IndirectFitDataCreationHelper::SetUpADSWithWorkspace::SetUpADSWithWorkspace(), Mantid::DataObjects::FakeMD::setupDetectorCache(), MantidQt::MantidWidgets::ImageInfoPresenter::setWorkspace(), Mantid::CurveFitting::Functions::ComptonPeakProfile::setWorkspace(), Mantid::CurveFitting::Functions::InelasticDiffRotDiscreteCircle::setWorkspace(), Mantid::CurveFitting::Functions::InelasticDiffSphere::setWorkspace(), Mantid::API::IFunctionMD::setWorkspace(), Mantid::DataHandling::LoadDaveGrp::setWorkspaceAxes(), Mantid::IndirectFitDataCreationHelper::setWorkspaceBinEdges(), Mantid::IndirectFitDataCreationHelper::setWorkspaceEFixed(), Mantid::IndirectFitDataCreationHelper::setWorkspaceProperties(), Mantid::API::SpectrumDetectorMapping::SpectrumDetectorMapping(), Mantid::Algorithms::CalculateEfficiency2::sumUnmaskedAndDeadPixels(), Mantid::Kernel::threadSafe(), MantidQt::API::PlotAxis::titleFromIndex(), MantidQt::API::PlotAxis::titleFromYData(), Mantid::API::WorkspaceGroup::toString(), Mantid::DataHandling::LoadILLPolarizedDiffraction::transposeMonochromatic(), Mantid::API::IFunctionMD::useAllDimensions(), Mantid::Algorithms::CalculateDynamicRange::validateInputs(), Mantid::Algorithms::ConvertToDistribution::validateInputs(), Mantid::Algorithms::EditInstrumentGeometry::validateInputs(), Mantid::CurveFitting::Algorithms::QENSFitSequential::validateInputs(), Mantid::DataHandling::SaveNXcanSAS::validateInputs(), Mantid::API::WorkspaceGroup::workspaceBeforeReplaceHandle(), Mantid::Algorithms::WorkspaceBoundingBox::WorkspaceBoundingBox(), Mantid::API::WorkspaceNearestNeighbourInfo::WorkspaceNearestNeighbourInfo(), Mantid::DataHandling::SaveDiffFittingAscii::writeData(), Mantid::DataHandling::SaveFocusedXYE::writeHeaders(), Mantid::DataHandling::SaveNXTomo::writeImageKeyValue(), Mantid::DataHandling::SaveNXTomo::writeIntensityValue(), Mantid::DataHandling::SaveNXTomo::writeLogValues(), Mantid::DataHandling::SaveFocusedXYE::writeMAUDHeaders(), Mantid::DataHandling::SaveNXTomo::writeSingleWorkspace(), Mantid::DataHandling::SaveFocusedXYE::writeXYEHeaders(), and MantidQt::MantidWidgets::FitDomain::xLimits().