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Mantid
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#include <IPawleyFunction.h>
Public Member Functions | |
| virtual void | addPeak (const Kernel::V3D &hkl, double fwhm, double height)=0 |
| Add a peak with the given parameters. More... | |
| virtual void | clearPeaks ()=0 |
| Removes all peaks from the function. More... | |
| virtual size_t | getPeakCount () const =0 |
| Returns the number of peaks in the function. More... | |
| virtual IPeakFunction_sptr | getPeakFunction (size_t i) const =0 |
| Returns the profile function stored for the i-th peak. More... | |
| virtual Kernel::V3D | getPeakHKL (size_t i) const =0 |
| Returns the Miller indices stored for the i-th peak. More... | |
| IPawleyFunction () | |
| Default constructor. More... | |
| virtual void | setLatticeSystem (const std::string &crystalSystem)=0 |
| A string that names the crystal system. More... | |
| virtual void | setPeaks (const std::vector< Kernel::V3D > &hkls, double fwhm, double height)=0 |
| Assign several peaks with the same fwhm/height parameters. More... | |
| virtual void | setProfileFunction (const std::string &profileFunction)=0 |
| Sets the name of the profile function used for the reflections. More... | |
| virtual void | setUnitCell (const std::string &unitCellString)=0 |
| Set the function parameters according to the supplied unit cell. More... | |
Public Member Functions inherited from Mantid::API::FunctionParameterDecorator | |
| double | activeParameter (size_t i) const override |
| Value of i-th active parameter of the decorated function. More... | |
| void | addConstraint (std::unique_ptr< IConstraint > ic) override |
| Add a constraint to decorated function. More... | |
| void | applyTies () override |
| Apply the ties in decorated function. More... | |
| void | clearTies () override |
| Remove all ties of decorated function. More... | |
| IFunction_sptr | clone () const override |
| Virtual copy constructor. More... | |
| FunctionParameterDecorator () | |
| IFunction::Attribute | getAttribute (const std::string &attName) const override |
| Return a value of attribute attName of decorated function-. More... | |
| std::vector< std::string > | getAttributeNames () const override |
| Returns a list of attribute names of decorated function. More... | |
| IConstraint * | getConstraint (size_t i) const override |
| Get constraint of i-th parameter of decorated function. More... | |
| IFunction_sptr | getDecoratedFunction () const |
| double | getError (const std::string &name) const override |
| Get the fitting error for a parameter of decorated function by name. More... | |
| double | getError (size_t i) const override |
| Get the fitting error for a parameter of decorated function. More... | |
| double | getParameter (const std::string &name) const override |
| Get parameter of decorated function by name. More... | |
| double | getParameter (size_t i) const override |
| Get i-th parameter of decorated function. More... | |
| size_t | getParameterIndex (const ParameterReference &ref) const override |
| Return parameter index of decorated function from a parameter reference. More... | |
| ParameterTie * | getTie (size_t i) const override |
| Get the tie of i-th parameter of decorated function. More... | |
| bool | hasAttribute (const std::string &attName) const override |
| Check if attribute attName exists in decorated function. More... | |
| bool | hasParameter (const std::string &name) const override |
| Check if the decorated function has a parameter with this name. More... | |
| bool | isExplicitlySet (size_t i) const override |
| Checks if a parameter of decorated function has been set explicitly. More... | |
| size_t | nAttributes () const override |
| Returns the number of attributes associated with the decorated function. More... | |
| size_t | nParams () const override |
| Total number of parameters of decorated function. More... | |
| std::string | parameterDescription (size_t i) const override |
| Returns the description of parameter i of decorated function. More... | |
| size_t | parameterIndex (const std::string &name) const override |
| Returns the index of parameter of decorated function name. More... | |
| std::string | parameterName (size_t i) const override |
| Returns the name of parameter i of decorated function. More... | |
| void | removeConstraint (const std::string &parName) override |
| Remove a constraint of decorated function. More... | |
| void | removeTie (const std::string &parName) override |
| Removes the tie off a parameter. More... | |
| bool | removeTie (size_t i) override |
| Removes i-th parameter's of decorated function tie. More... | |
| void | setActiveParameter (size_t i, double value) override |
| Set new value of i-th active parameter of the decorated function. More... | |
| void | setAttribute (const std::string &attName, const IFunction::Attribute &attValue) override |
| Set a value to attribute attName of decorated function. More... | |
| void | setDecoratedFunction (const std::string &wrappedFunctionName) |
| void | setError (const std::string &name, double err) override |
| Set the fitting error for a parameter of decorated function by name. More... | |
| void | setError (size_t i, double err) override |
| Set the fitting error for a parameter of decorated function. More... | |
| void | setMatrixWorkspace (std::shared_ptr< const MatrixWorkspace > workspace, size_t wi, double startX, double endX) override |
| Set matrix workspace. More... | |
| void | setParameter (const std::string &name, const double &value, bool explicitlySet=true) override |
| Set parameter of decorated function by name. More... | |
| void | setParameter (size_t i, const double &value, bool explicitlySet=true) override |
| Set i-th parameter of decorated function. More... | |
| void | setParameterDescription (const std::string &name, const std::string &description) override |
| Set description of parameter of decorated function by name. More... | |
| void | setParameterDescription (size_t i, const std::string &description) override |
| Set i-th parameter description of decorated function. More... | |
| void | setUpForFit () override |
| Set parameters of decorated function to satisfy constraints. More... | |
| void | setWorkspace (std::shared_ptr< const Workspace > ws) override |
| Set the workspace. More... | |
| void | tie (const std::string &parName, const std::string &expr, bool isDefault=false) override |
| Tie a parameter of decorated function to other parameters (or a constant). More... | |
Public Member Functions inherited from Mantid::API::IFunction | |
| std::string | asString () const |
| Writes itself into a string. More... | |
| bool | cancellationRequestReceived () const |
| Returns true if a progress reporter is set & evalaution has been requested to stop. More... | |
| virtual const std::vector< std::string > | categories () const |
| Function to return all of the categories that contain this algorithm. More... | |
| virtual const std::string | category () const |
| The categories the Fit function belong to. More... | |
| virtual const std::string | categorySeparator () const |
| Function to return the sperator token for the category string. More... | |
| virtual std::shared_ptr< IFunction > | clone () const |
| Virtual copy constructor. More... | |
| virtual int64_t | estimateNoProgressCalls () const |
| Returns an estimate of the number of progress reports a single evaluation of the function will have. More... | |
| virtual void | function (const FunctionDomain &domain, FunctionValues &values) const =0 |
| Evaluates the function for all arguments in the domain. More... | |
| virtual void | functionDeriv (const FunctionDomain &domain, Jacobian &jacobian) |
| Derivatives of function with respect to active parameters. More... | |
| IFunction () | |
| Constructor. More... | |
| IFunction (const IFunction &)=delete | |
| No copying. More... | |
| virtual void | initialize () |
| Iinialize the function. More... | |
| virtual void | iterationFinished () |
| Called at the end of an iteration. More... | |
| virtual void | iterationStarting () |
| Called at the start of each iteration. More... | |
| virtual std::string | name () const =0 |
| Returns the function's name. More... | |
| IFunction & | operator= (const IFunction &)=delete |
| No copying. More... | |
| virtual void | registerFunctionUsage (bool internal) |
| Registers the usage of the algorithm with the UsageService. More... | |
| void | reportProgress (const std::string &msg="") const |
| Reports progress with an optional message. More... | |
| virtual void | setMatrixWorkspace (std::shared_ptr< const API::MatrixWorkspace > workspace, size_t wi, double startX, double endX) |
| Set matrix workspace. More... | |
| void | setProgressReporter (std::shared_ptr< Kernel::ProgressBase > reporter) |
| Attach a progress reporter. More... | |
| virtual void | setWorkspace (std::shared_ptr< const Workspace > ws) |
| Set the workspace. More... | |
| virtual | ~IFunction () |
| Virtual destructor. More... | |
| bool | isFixed (size_t i) const |
| Check if a parameter i is fixed. More... | |
| bool | isFixedByDefault (size_t i) const |
| Check if a parameter i is fixed by default (not by user). More... | |
| void | fix (size_t i, bool isDefault=false) |
| Removes a parameter i from the list of active. More... | |
| void | unfix (size_t i) |
| Restores a declared parameter i to the active status. More... | |
| void | fixParameter (const std::string &name, bool isDefault=false) |
| Fix a parameter. More... | |
| void | unfixParameter (const std::string &name) |
| Free a parameter. More... | |
| void | fixAll (bool isDefault=false) |
| Fix all parameters. More... | |
| void | unfixAll () |
| Free all parameters. More... | |
| void | unfixAllDefault () |
| Free all parameters fixed by default. More... | |
| void | fixAllActive (bool isDefault=false) |
| Fix all active parameters. More... | |
| std::vector< std::string > | getParameterNames () const |
| Return a vector with all parameter names. More... | |
| virtual std::string | nameOfActive (size_t i) const |
| Returns the name of active parameter i. More... | |
| virtual std::string | descriptionOfActive (size_t i) const |
| Returns the name of active parameter i. More... | |
| bool | isActive (size_t i) const |
| Check if an active parameter i is actually active. More... | |
| virtual void | addTies (const std::string &ties, bool isDefault=false) |
| Add several ties. More... | |
| virtual bool | ignoreTie (const ParameterTie &) const |
| Ignore a tie. More... | |
| void | sortTies () |
| Put all ties in order in which they will be applied correctly. More... | |
| std::string | writeTies () const |
| Write a parameter tie to a string. More... | |
| virtual void | addConstraints (const std::string &str, bool isDefault=false) |
| Add a list of conatraints from a string. More... | |
| virtual void | setConstraintPenaltyFactor (const std::string &parName, const double &c) |
| Set a constraint penalty. More... | |
| std::string | writeConstraints () const |
| Write a parameter constraint to a string. More... | |
| virtual void | clearConstraints () |
| Remove all constraints. More... | |
| virtual std::string | attributeName (size_t index) const |
| Get name of ith attribute. More... | |
| template<typename T > | |
| void | setAttributeValue (const std::string &attName, const T &value) |
| Set an attribute value. More... | |
| void | setAttributeValue (const std::string &attName, const char *value) |
| Overload for const char* values. More... | |
| void | setAttributeValue (const std::string &attName, const std::string &value) |
| Set string attribute by value. More... | |
| virtual std::shared_ptr< IFunction > | getFunction (size_t i) const |
| Returns the pointer to i-th child function. More... | |
| virtual std::size_t | nFunctions () const |
| Number of child functions. More... | |
| virtual size_t | getValuesSize (const FunctionDomain &domain) const |
| Get number of values for a given domain. More... | |
| virtual size_t | getNumberDomains () const |
| Get number of domains required by this function. More... | |
| virtual std::vector< std::shared_ptr< IFunction > > | createEquivalentFunctions () const |
| Split this function (if needed) into a list of independent functions. More... | |
| void | calNumericalDeriv (const FunctionDomain &domain, Jacobian &jacobian) |
| Calculate numerical derivatives. More... | |
| double | calculateStepSize (const double parameterValue) const |
| Calculate step size for the given parameter value. More... | |
| void | setCovarianceMatrix (const std::shared_ptr< Kernel::Matrix< double > > &covar) |
| Set the covariance matrix. More... | |
| std::shared_ptr< const Kernel::Matrix< double > > | getCovarianceMatrix () const |
| Get the covariance matrix. More... | |
| void | setReducedChiSquared (double chi2) |
| Set the reduced chi^2. More... | |
| double | getReducedChiSquared () const |
| Get the reduced chi^2. More... | |
| void | setParallel (bool on) |
| Set the parallel hint. More... | |
| bool | isParallel () const |
| Get the parallel hint. More... | |
| void | setHandler (std::unique_ptr< FunctionHandler > handler) |
| Set a function handler. More... | |
| FunctionHandler * | getHandler () const |
| Return the handler. More... | |
| virtual void | setStepSizeMethod (const StepSizeMethod method) |
| Sets the StepSizeMethod to use when calculation the step size. More... | |
Additional Inherited Members | |
Public Types inherited from Mantid::API::IFunction | |
| enum | ParameterStatus { Active , Fixed , FixedByDefault , Tied } |
| Describe parameter status in relation to fitting: Active: Fit varies such parameter directly. More... | |
| enum class | StepSizeMethod { DEFAULT , SQRT_EPSILON } |
| Describes the method in which the step size will be calculated: DEFAULT: Uses the traditional Mantid method of calculating the step size. More... | |
Protected Member Functions inherited from Mantid::API::FunctionParameterDecorator | |
| void | addTie (std::unique_ptr< ParameterTie >) override |
| Forwads addTie-call to the decorated function. More... | |
| virtual void | beforeDecoratedFunctionSet (const IFunction_sptr &fn) |
| Function that is called before the decorated function is set. More... | |
| void | declareParameter (const std::string &name, double initValue, const std::string &description) override |
| Does nothing, function does not have parameters. More... | |
| ParameterStatus | getParameterStatus (size_t i) const override |
| Get status of parameter. More... | |
| void | init () override |
| Does nothing. More... | |
| void | setDecoratedFunctionPrivate (const IFunction_sptr &fn) |
| void | setParameterStatus (size_t i, ParameterStatus status) override |
| Change status of parameter. More... | |
| void | throwIfNoFunctionSet () const |
| Throws std::runtime_error when m_wrappedFunction is not set. More... | |
Protected Member Functions inherited from Mantid::API::IFunction | |
| double | convertValue (double value, Kernel::Unit_sptr &outUnit, const std::shared_ptr< const MatrixWorkspace > &ws, size_t wsIndex) const |
| Convert a value from one unit (inUnit) to unit defined in workspace (ws) More... | |
| void | convertValue (std::vector< double > &values, Kernel::Unit_sptr &outUnit, const std::shared_ptr< const MatrixWorkspace > &ws, size_t wsIndex) const |
| Convert values from unit defined in workspace (ws) to outUnit. More... | |
| virtual void | declareAttributes () |
| Override to declare function attributes. More... | |
| virtual void | declareParameters () |
| Override to declare function parameters. More... | |
| void | declareAttribute (const std::string &name, const API::IFunction::Attribute &defaultValue) |
| Declare a single attribute. More... | |
| void | declareAttribute (const std::string &name, const API::IFunction::Attribute &defaultValue, const Kernel::IValidator &validator) |
| Declare a single attribute with validator. More... | |
| void | checkAttributeName (const std::string &name) |
| Check Attribute to declare does not already exist. More... | |
| void | storeAttributeValue (const std::string &name, const API::IFunction::Attribute &value) |
| Store an attribute's value. More... | |
| void | storeReadOnlyAttribute (const std::string &name, const API::IFunction::Attribute &value) const |
| A read-only ("mutable") attribute can be stored in a const method. More... | |
| bool | hasOrderedTies () const |
| void | applyOrderedTies () |
| virtual std::string | writeToString (const std::string &parentLocalAttributesStr="") const |
| Writes itself into a string. More... | |
Protected Attributes inherited from Mantid::API::FunctionParameterDecorator | |
| IFunction_sptr | m_wrappedFunction |
Protected Attributes inherited from Mantid::API::IFunction | |
| bool | m_isParallel |
| Flag to hint that the function is being used in parallel computations. More... | |
| std::unique_ptr< FunctionHandler > | m_handler |
| Pointer to a function handler. More... | |
| std::shared_ptr< Kernel::ProgressBase > | m_progReporter |
| Pointer to the progress handler. More... | |
This abstract class defines the interface of a PawleyFunction. An implementation can be found in CurveFitting/PawleyFunction. This interface exists so that the function can be used in modules outside CurveFitting.
Definition at line 25 of file IPawleyFunction.h.
| Mantid::API::IPawleyFunction::IPawleyFunction | ( | ) |
Default constructor.
Definition at line 11 of file IPawleyFunction.cpp.
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pure virtual |
Add a peak with the given parameters.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Removes all peaks from the function.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Returns the number of peaks in the function.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Returns the profile function stored for the i-th peak.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Returns the Miller indices stored for the i-th peak.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
A string that names the crystal system.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Assign several peaks with the same fwhm/height parameters.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Sets the name of the profile function used for the reflections.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.
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pure virtual |
Set the function parameters according to the supplied unit cell.
Implemented in Mantid::CurveFitting::Functions::PawleyFunction.