Mantid::Nexus::NXDataSetTyped< T > Class Template Reference

Templated class implementation of NXDataSet. More...

#include <NexusClasses.h>

Inheritance diagram for Mantid::Nexus::NXDataSetTyped< T >:

Public Member Functions
void	load ()
	Read all of the datablock in.
void	load (dimsize_t const blocksize, dimsize_t const i)
void	load (dimsize_t const blocksize, dimsize_t const i, dimsize_t const j)
	Implementation of the virtual NXDataSet::load(...) method.
	NXDataSetTyped (NXClass const &parent, std::string const &name)
	Constructor.
T *	operator() ()
const T *	operator() () const
	Returns a pointer to the internal data buffer.
T &	operator() (std::size_t i, std::size_t j)
const T &	operator() (std::size_t i, std::size_t j) const
	Returns a value assuming the data is a two-dimensional array.
T &	operator() (std::size_t i, std::size_t j, std::size_t k)
const T &	operator() (std::size_t i, std::size_t j, std::size_t k) const
	Returns a value assuming the data is a tree-dimensional array.
T &	operator[] (std::size_t i)
const T &	operator[] (std::size_t i) const
	Returns the i-th value in the internal buffer.
std::size_t	size () const
	Returns the size of the data buffer.
container_T< T > &	vecBuffer ()
	Returns a the internal buffer.
Public Member Functions inherited from Mantid::Nexus::NXDataSet
dimsize_t	dim0 () const
	Returns the number of elements along the first dimension.
dimsize_t	dim1 () const
	Returns the number of elements along the second dimension.
dimsize_t	dim2 () const
	Returns the number of elements along the third dimension.
dimsize_t	dim3 () const
	Returns the number of elements along the fourth dimension.
dimsize_t	dims (std::size_t i) const
	Returns the number of elements along i-th dimension.
std::string	name () const
	Returns the name of the data set.
std::string	NX_class () const override
	NX class name. Returns "SDS".
	NXDataSet (NXClass const &parent, std::string const &name)
	Constructor.
void	open ()
	Opens the data set. Does not read in any data. Call load(...) to load the data.
void	openLocal ()
	Opens datasets faster but the parent group must be already open.
std::size_t	rank () const
	Returns the rank (number of dimensions) of the data. The maximum is 4.
NXnumtype	type () const
	Returns the Nexus type of the data. The types are defined in NexusFile_fwd.h.
Public Member Functions inherited from Mantid::Nexus::NXObject
NexusAddress const &	address () const
	Returns the absolute address to the object.
std::string	name () const
	Returns the name of the object.
	NXObject (File *fileID, NXClass const *parent, std::string const &name)
	NXObject constructor.
	NXObject (std::shared_ptr< File > const &fileID, NXClass const *parent, std::string const &name)
	NXObject constructor.
virtual	~NXObject ()=default

Private Member Functions
void	alloc (dimsize_t new_size)
	Allocates memory for the data buffer.
void	rangeError () const
	A shortcut to "throw std::range_error("Nexus dataset range error");".

Private Attributes
container_T< T >	m_data
	The data buffer.
std::size_t	m_size
	The buffer size.

Additional Inherited Members
Public Attributes inherited from Mantid::Nexus::NXDataSet
NXAttributes	attributes
	Attributes.
Public Attributes inherited from Mantid::Nexus::NXObject
std::shared_ptr< File >	m_fileID
	Nexus file id.
Protected Member Functions inherited from Mantid::Nexus::NXDataSet
template<typename NumT >
void	getData (NumT *data)
	Wrapper to the NXgetdata.
template<typename NumT >
void	getSlab (NumT *data, DimVector const &start, DimVector const &size)
	Wrapper to the NXgetslab.
Protected Attributes inherited from Mantid::Nexus::NXDataSet
NXInfo	m_info
	Holds the data info.
Protected Attributes inherited from Mantid::Nexus::NXObject
NexusAddress	m_address
	Keeps the absolute address to the object.
bool	m_open
	Set to true if the object has been open.

Detailed Description

template<class T>
class Mantid::Nexus::NXDataSetTyped< T >

Templated class implementation of NXDataSet.

After loading the data it can be accessed via operators () and [].

Definition at line 198 of file NexusClasses.h.

Constructor & Destructor Documentation

NXDataSetTyped()

template<class T >

Mantid::Nexus::NXDataSetTyped< T >::NXDataSetTyped ( NXClass const &  parent, std::string const &  name  )

inline

Constructor.

Parameters

parent	:: The parent Nexus class. In terms of HDF it is the group containing the dataset.
name	:: The name of the dataset relative to its parent

Definition at line 207 of file NexusClasses.h.

Member Function Documentation

alloc()

template<class T >

void Mantid::Nexus::NXDataSetTyped< T >::alloc ( dimsize_t  new_size )

inlineprivate

Allocates memory for the data buffer.

Parameters

new_size

:: The number of elements to allocate.

Definition at line 395 of file NexusClasses.h.

References Mantid::Nexus::NXObject::address(), Mantid::Nexus::NXDataSetTyped< T >::m_data, and Mantid::Nexus::NXDataSetTyped< T >::m_size.

Referenced by Mantid::Nexus::NXDataSetTyped< T >::load(), Mantid::Nexus::NXDataSetTyped< T >::load(), and Mantid::Nexus::NXDataSetTyped< T >::load().

load() [1/3]

template<class T >

void Mantid::Nexus::NXDataSetTyped< T >::load ( )

inline

Read all of the datablock in.

Definition at line 278 of file NexusClasses.h.

References Mantid::Nexus::NXDataSetTyped< T >::alloc(), Mantid::Nexus::NXInfo::dims, Mantid::Nexus::NXDataSet::getData(), Mantid::Nexus::NXDataSetTyped< T >::m_data, Mantid::Nexus::NXDataSet::m_info, and Mantid::Nexus::NXDataSet::rank().

Referenced by Mantid::DataHandling::LoadNexusProcessed::doAccelleratedMultiPeriodLoading(), Mantid::DataHandling::LoadISISNexus2::exec(), Mantid::DataHandling::LoadQKK::exec(), Mantid::DataHandling::LoadNexusProcessed2::extractMappingInfoNew(), Mantid::DataHandling::LoadISISNexusHelper::findDetectorIDsAndSpectrumNumber(), Mantid::DataHandling::LoadISISNexusHelper::findNumberOfSpectra(), Mantid::Nexus::NXClass::getDouble(), Mantid::Nexus::NXClass::getFloat(), Mantid::Nexus::NXClass::getInt(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::getIntVector(), Mantid::DataHandling::GetNeXusValue(), Mantid::DataHandling::GetNeXusValue< double >(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::getPeriodTotalCounts(), Mantid::DataHandling::LoadHelper::getTimeBinningFromNexusAddress(), Mantid::DataHandling::LoadILLSANS::getVariableTimeBinning(), Mantid::DataHandling::LoadILLReflectometry::initNames(), Mantid::DataHandling::LoadILLPolarizedDiffraction::initStaticWorkspace(), Mantid::DataHandling::LoadILLSANS::initWorkSpaceD11B(), Mantid::DataHandling::LoadILLSANS::initWorkSpaceD22B(), Mantid::DataHandling::LoadILLSANS::initWorkSpaceD33(), Mantid::DataHandling::LoadNexusProcessed::loadBlock(), Mantid::DataHandling::LoadNexusProcessed::loadBlock(), Mantid::DataHandling::LoadNexusProcessed::loadBlock(), Mantid::DataHandling::LoadISISNexus2::loadBlock(), Mantid::DataHandling::LoadILLIndirect2::loadDataDetails(), Mantid::DataHandling::LoadILLReflectometry::loadDataDetails(), Mantid::DataHandling::LoadMLZ::loadDataIntoTheWorkSpace(), Mantid::DataHandling::LoadSINQFocus::loadDataIntoTheWorkSpace(), Mantid::DataHandling::LoadILLDiffraction::loadDataScan(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::loadDeadTimesFromNexus(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::loadDetectorGroupingFromNexus(), Mantid::DataHandling::LoadNexusProcessed::loadEntry(), Mantid::DataHandling::LoadNexusProcessed::loadEventEntry(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::loadGoodFramesDataFromNexus(), Mantid::DataHandling::LoadNexusProcessed::loadLeanElasticPeaksEntry(), Mantid::DataHandling::LoadNexusProcessed::loadNonSpectraAxis(), Mantid::DataHandling::LoadNexusProcessed::loadNumericColumn(), Mantid::DataHandling::LoadBBY::loadNXDataSet(), Mantid::DataHandling::ANSTO::Anxs::loadNXDataSet(), Mantid::DataHandling::loadNXDataSet(), Mantid::DataHandling::LoadNexusProcessed::loadPeaksEntry(), Mantid::DataHandling::LoadISISNexus2::loadPeriodData(), Mantid::DataHandling::LoadISISNexusHelper::loadRunDetails(), Mantid::DataHandling::LoadISISNexusHelper::loadSampleGeometry(), Mantid::DataHandling::LoadILLTOF3::loadTimeDetails(), Mantid::DataHandling::LoadMLZ::loadTimeDetails(), Mantid::DataHandling::LoadILLPolarizedDiffraction::loadTwoThetaDetectors(), Mantid::DataHandling::LoadNexusProcessed::loadV3DColumn(), Mantid::DataHandling::LoadNexusProcessed::loadVectorColumn(), Mantid::DataHandling::LoadMLZ::maskDetectors(), Mantid::DataHandling::LoadILLIndirect2::moveSingleDetectors(), Mantid::DataHandling::LoadILLPolarizedDiffraction::moveTwoTheta(), Mantid::DataHandling::LoadILLPolarizedDiffraction::prepareAxes(), Mantid::DataHandling::LoadILLTOF3::prepareAxis(), Mantid::DataHandling::LoadNexusProcessed::readBinMasking(), and Mantid::DataHandling::LoadILLReflectometry::sampleAngle().

load() [2/3]

template<class T >

void Mantid::Nexus::NXDataSetTyped< T >::load ( dimsize_t const  blocksize, dimsize_t const  i  )

inline

Definition at line 301 of file NexusClasses.h.

References Mantid::Nexus::NXDataSetTyped< T >::alloc(), Mantid::Nexus::NXDataSet::dim0(), Mantid::Nexus::NXDataSet::dim1(), Mantid::Nexus::NXDataSet::dim2(), Mantid::Nexus::NXDataSet::dim3(), Mantid::Nexus::NXDataSet::getSlab(), Mantid::Geometry::m, Mantid::Nexus::NXDataSetTyped< T >::m_data, n, Mantid::Nexus::NXDataSetTyped< T >::rangeError(), and Mantid::Nexus::NXDataSet::rank().

load() [3/3]

template<class T >

void Mantid::Nexus::NXDataSetTyped< T >::load ( dimsize_t const  blocksize, dimsize_t const  i, dimsize_t const  j  )

inline

Implementation of the virtual NXDataSet::load(...) method.

Internally the data are stored as a 1d array. If the data are loaded in chunks the newly read in data replace the old ones. The actual rank of the loaded data is equal or less than the rank of the dataset (returned by rank() method).

Parameters

blocksize	:: The size of the block of data that should be read. Note that this is only used for rank 2 and 3 datasets currently
i	:: Calling load with non-negative i reads in a chunk of dimension rank()-1 and i is the index of the chunk. The rank of the data must be >= 1
j	:: Non-negative value makes it read a chunk of dimension rank()-2. i and j are its indeces. The rank of the data must be >= 2

Definition at line 351 of file NexusClasses.h.

References Mantid::Nexus::NXDataSetTyped< T >::alloc(), Mantid::Nexus::NXDataSet::dim0(), Mantid::Nexus::NXDataSet::dim1(), Mantid::Nexus::NXDataSet::dim2(), Mantid::Nexus::NXDataSet::dim3(), Mantid::Nexus::NXDataSet::getSlab(), Mantid::Geometry::m, Mantid::Nexus::NXDataSetTyped< T >::m_data, n, Mantid::Nexus::NXDataSetTyped< T >::rangeError(), and Mantid::Nexus::NXDataSet::rank().

operator()() [1/6]

template<class T >

T * Mantid::Nexus::NXDataSetTyped< T >::operator() ( )

inline

Definition at line 220 of file NexusClasses.h.

References Mantid::Nexus::NXObject::address(), and Mantid::Nexus::NXDataSetTyped< T >::m_data.

operator()() [2/6]

template<class T >

const T * Mantid::Nexus::NXDataSetTyped< T >::operator() ( ) const

inline

Returns a pointer to the internal data buffer.

Exceptions

runtime_error

exception if the data have not been loaded / initialized.

Returns

a pointer to the array of items

Definition at line 214 of file NexusClasses.h.

References Mantid::Nexus::NXObject::address(), and Mantid::Nexus::NXDataSetTyped< T >::m_data.

operator()() [3/6]

template<class T >

T & Mantid::Nexus::NXDataSetTyped< T >::operator() ( std::size_t  i, std::size_t  j  )

inline

Definition at line 253 of file NexusClasses.h.

operator()() [4/6]

template<class T >

const T & Mantid::Nexus::NXDataSetTyped< T >::operator() ( std::size_t  i, std::size_t  j  ) const

inline

Returns a value assuming the data is a two-dimensional array.

Parameters

i	:: The index along dim0()
j	:: The index along dim1()

Exceptions

runtime_error	if the data have not been loaded / initialized.
range_error	if the indeces point outside the buffer.

Returns

A reference to the value

Definition at line 252 of file NexusClasses.h.

References Mantid::Nexus::NXDataSet::dim1(), and Mantid::Nexus::NXDataSetTyped< T >::operator[]().

operator()() [5/6]

template<class T >

T & Mantid::Nexus::NXDataSetTyped< T >::operator() ( std::size_t  i, std::size_t  j, std::size_t  k  )

inline

Definition at line 268 of file NexusClasses.h.

operator()() [6/6]

template<class T >

const T & Mantid::Nexus::NXDataSetTyped< T >::operator() ( std::size_t  i, std::size_t  j, std::size_t  k  ) const

inline

Returns a value assuming the data is a tree-dimensional array.

Parameters

i	:: The index along dim0()
j	:: The index along dim1()
k	:: The index along dim2()

Exceptions

runtime_error	if the data have not been loaded / initialized.
range_error	if the indeces point outside the buffer.

Returns

A reference to the value

Definition at line 265 of file NexusClasses.h.

References Mantid::Nexus::NXDataSet::dim1(), Mantid::Nexus::NXDataSet::dim2(), and Mantid::Nexus::NXDataSetTyped< T >::operator[]().

operator[]() [1/2]

template<class T >

T & Mantid::Nexus::NXDataSetTyped< T >::operator[] ( std::size_t  i )

inline

Definition at line 242 of file NexusClasses.h.

operator[]() [2/2]

template<class T >

const T & Mantid::Nexus::NXDataSetTyped< T >::operator[] ( std::size_t  i ) const

inline

Returns the i-th value in the internal buffer.

Parameters

i	:: The linear index of the data element

Exceptions

runtime_error	if the data have not been loaded / initialized.
range_error	if the index is greater than the buffer size.

Returns

A reference to the value

Definition at line 234 of file NexusClasses.h.

References Mantid::Nexus::NXObject::address(), Mantid::Nexus::NXDataSetTyped< T >::m_data, Mantid::Nexus::NXDataSetTyped< T >::m_size, and Mantid::Nexus::NXDataSetTyped< T >::rangeError().

Referenced by Mantid::Nexus::NXDataSetTyped< T >::operator()(), and Mantid::Nexus::NXDataSetTyped< T >::operator()().

rangeError()

template<class T >

void Mantid::Nexus::NXDataSetTyped< T >::rangeError ( ) const

inlineprivate

A shortcut to "throw std::range_error("Nexus dataset range error");".

Definition at line 411 of file NexusClasses.h.

Referenced by Mantid::Nexus::NXDataSetTyped< T >::load(), Mantid::Nexus::NXDataSetTyped< T >::load(), and Mantid::Nexus::NXDataSetTyped< T >::operator[]().

size()

template<class T >

std::size_t Mantid::Nexus::NXDataSetTyped< T >::size ( ) const

inline

Returns the size of the data buffer.

Definition at line 275 of file NexusClasses.h.

References Mantid::Nexus::NXDataSetTyped< T >::m_size.

Referenced by Mantid::DataHandling::LoadNexusProcessed::loadEntry(), and Mantid::DataHandling::LoadMLZ::maskDetectors().

vecBuffer()

template<class T >

container_T< T > & Mantid::Nexus::NXDataSetTyped< T >::vecBuffer ( )

inline

Returns a the internal buffer.

Definition at line 273 of file NexusClasses.h.

References Mantid::Nexus::NXDataSetTyped< T >::m_data.

Referenced by Mantid::DataHandling::LoadISISNexus2::exec(), Mantid::DataHandling::LoadNexusProcessed2::extractMappingInfoNew(), Mantid::DataHandling::LoadMuonNexusV2NexusHelper::getPeriodTotalCounts(), Mantid::DataHandling::LoadNexusProcessed::loadEventEntry(), and Mantid::DataHandling::LoadMuonNexusV2NexusHelper::loadTimeZeroListFromNexusFile().

Member Data Documentation

m_data

template<class T >

container_T<T> Mantid::Nexus::NXDataSetTyped< T >::m_data

private

The data buffer.

Definition at line 413 of file NexusClasses.h.

Referenced by Mantid::Nexus::NXDataSetTyped< T >::alloc(), Mantid::Nexus::NXDataSetTyped< T >::load(), Mantid::Nexus::NXDataSetTyped< T >::load(), Mantid::Nexus::NXDataSetTyped< T >::load(), Mantid::Nexus::NXDataSetTyped< T >::operator()(), Mantid::Nexus::NXDataSetTyped< T >::operator()(), Mantid::Nexus::NXDataSetTyped< T >::operator[](), and Mantid::Nexus::NXDataSetTyped< T >::vecBuffer().

m_size

template<class T >

std::size_t Mantid::Nexus::NXDataSetTyped< T >::m_size

private

The buffer size.

Definition at line 414 of file NexusClasses.h.

Referenced by Mantid::Nexus::NXDataSetTyped< T >::alloc(), Mantid::Nexus::NXDataSetTyped< T >::operator[](), and Mantid::Nexus::NXDataSetTyped< T >::size().

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The documentation for this class was generated from the following file:

• Framework/Nexus/inc/MantidNexus/NexusClasses.h