NexusIOHelper.h

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// Mantid Repository : https://github.com/mantidproject/mantid
//
// Copyright © 2007 ISIS Rutherford Appleton Laboratory UKRI,
//   NScD Oak Ridge National Laboratory, European Spallation Source,
//   Institut Laue - Langevin & CSNS, Institute of High Energy Physics, CAS
// SPDX - License - Identifier: GPL - 3.0 +
#pragma once
 
#include "MantidIndexing/DllConfig.h"
#include <algorithm>
#include <boost/any.hpp>
#include <cstdint>
#include <nexus/NeXusFile.hpp>
#include <numeric>
#include <string>
#include <utility>
 
namespace Mantid {
namespace NeXus {
namespace NeXusIOHelper {
 
struct AllowNarrowing {};
struct PreventNarrowing {};
 
namespace {
 
#define RUN_NEXUSIOHELPER_FUNCTION(Narrow, type, func_name, ...)                                                       \
  switch (type) {                                                                                                      \
  case ::NeXus::FLOAT32:                                                                                               \
    return func_name<T, float, Narrow>(__VA_ARGS__);                                                                   \
  case ::NeXus::FLOAT64:                                                                                               \
    return func_name<T, double, Narrow>(__VA_ARGS__);                                                                  \
  case ::NeXus::INT8:                                                                                                  \
    return func_name<T, int8_t, Narrow>(__VA_ARGS__);                                                                  \
  case ::NeXus::UINT8:                                                                                                 \
    return func_name<T, uint8_t, Narrow>(__VA_ARGS__);                                                                 \
  case ::NeXus::INT16:                                                                                                 \
    return func_name<T, int16_t, Narrow>(__VA_ARGS__);                                                                 \
  case ::NeXus::UINT16:                                                                                                \
    return func_name<T, uint16_t, Narrow>(__VA_ARGS__);                                                                \
  case ::NeXus::INT32:                                                                                                 \
    return func_name<T, int32_t, Narrow>(__VA_ARGS__);                                                                 \
  case ::NeXus::UINT32:                                                                                                \
    return func_name<T, uint32_t, Narrow>(__VA_ARGS__);                                                                \
  case ::NeXus::INT64:                                                                                                 \
    return func_name<T, int64_t, Narrow>(__VA_ARGS__);                                                                 \
  case ::NeXus::UINT64:                                                                                                \
    return func_name<T, uint64_t, Narrow>(__VA_ARGS__);                                                                \
  default:                                                                                                             \
    throw std::runtime_error("NeXusIOHelper: Unknown type in Nexus file");                                             \
  }
 
int64_t vectorVolume(const std::vector<int64_t> &size) {
  return std::accumulate(size.begin(), size.end(), int64_t{1}, std::multiplies<>());
}
 
std::pair<::NeXus::Info, bool> checkIfOpenAndGetInfo(::NeXus::File &file, const std::string &&entry) {
  std::pair<::NeXus::Info, bool> info_and_close;
  info_and_close.second = false;
  if (!file.isDataSetOpen()) {
    file.openData(entry);
    info_and_close.second = true;
  }
  info_and_close.first = file.getInfo();
  return info_and_close;
}
 
template <typename T> void callGetData(::NeXus::File &file, std::vector<T> &buf, const bool close_file) {
  file.getData(buf);
  if (close_file)
    file.closeData();
}
 
template <typename T> void callGetData(::NeXus::File &file, T &buf, const bool close_file) {
  file.getData(&buf);
  if (close_file)
    file.closeData();
}
 
template <typename T>
void callGetSlab(::NeXus::File &file, std::vector<T> &buf, const std::vector<int64_t> &start,
                 const std::vector<int64_t> &size, const bool close_file) {
  file.getSlab(buf.data(), start, size);
  if (close_file)
    file.closeData();
}
 
template <typename T, typename U, typename Narrow>
void doReadNexusAnyVector(std::vector<T> &out, ::NeXus::File &file, const size_t size, const bool close_file) {
  if constexpr (sizeof(T) < sizeof(U) && !std::is_same_v<Narrow, AllowNarrowing>) {
    if (close_file)
      file.closeData();
    throw std::runtime_error("Narrowing is forbidden in NeXusIOHelper::readNexusAnyVector");
  } else if constexpr (std::is_same_v<T, U>) {
    if (size > 0)
      callGetData(file, out, close_file);
  } else {
    if (size > 0) {
      std::vector<U> buf(size);
      callGetData(file, buf, close_file);
      std::transform(buf.begin(), buf.end(), out.begin(), [](U a) -> T { return static_cast<T>(a); });
    }
  }
}
 
template <typename T, typename U, typename Narrow>
std::vector<T> readNexusAnyVector(::NeXus::File &file, const size_t size, const bool close_file) {
  std::vector<T> vec(size);
  doReadNexusAnyVector<T, U, Narrow>(vec, file, size, close_file);
  return vec;
}
 
template <typename T, typename U, typename Narrow>
void readNexusAnyVector(std::vector<T> &out, ::NeXus::File &file, const size_t size, const bool close_file) {
  if (out.size() < size)
    throw std::runtime_error("The output buffer is too small in NeXusIOHelper::readNexusAnyVector");
  doReadNexusAnyVector<T, U, Narrow>(out, file, size, close_file);
}
 
template <typename T, typename U, typename Narrow>
void doReadNexusAnySlab(std::vector<T> &out, ::NeXus::File &file, const std::vector<int64_t> &start,
                        const std::vector<int64_t> &size, const int64_t volume, const bool close_file) {
  if constexpr (sizeof(T) < sizeof(U) && !std::is_same_v<Narrow, AllowNarrowing>) {
    if (close_file)
      file.closeData();
    throw std::runtime_error("Narrowing is forbidden in NeXusIOHelper::readNexusAnySlab");
  } else if constexpr (std::is_same_v<T, U>) {
    if (volume > 0)
      callGetSlab(file, out, start, size, close_file);
  } else {
    if (volume > 0) {
      std::vector<U> buf(volume);
      callGetSlab(file, buf, start, size, close_file);
      std::transform(buf.begin(), buf.end(), out.begin(), [](U a) -> T { return static_cast<T>(a); });
    }
  }
}
 
template <typename T, typename U, typename Narrow>
std::vector<T> readNexusAnySlab(::NeXus::File &file, const std::vector<int64_t> &start,
                                const std::vector<int64_t> &size, const bool close_file) {
  const auto volume = vectorVolume(size);
  std::vector<T> vec(volume);
  doReadNexusAnySlab<T, U, Narrow>(vec, file, start, size, volume, close_file);
  return vec;
}
 
template <typename T, typename U, typename Narrow>
void readNexusAnySlab(std::vector<T> &out, ::NeXus::File &file, const std::vector<int64_t> &start,
                      const std::vector<int64_t> &size, const bool close_file) {
  const auto volume = vectorVolume(size);
  if (out.size() < static_cast<size_t>(volume))
    throw std::runtime_error("The output buffer is too small in NeXusIOHelper::readNexusAnySlab");
  doReadNexusAnySlab<T, U, Narrow>(out, file, start, size, volume, close_file);
}
 
template <typename T, typename U, typename Narrow> T readNexusAnyVariable(::NeXus::File &file, const bool close_file) {
  if constexpr (sizeof(T) < sizeof(U) && !std::is_same_v<Narrow, AllowNarrowing>) {
    if (close_file)
      file.closeData();
    throw std::runtime_error("Narrowing is forbidden in NeXusIOHelper::readAnyVariable");
  } else if constexpr (std::is_same_v<T, U>) {
    T buf;
    callGetData(file, buf, close_file);
    return buf;
  } else {
    U buf;
    callGetData(file, buf, close_file);
    return static_cast<T>(buf);
  }
}
 
} // end of anonymous namespace
 
template <typename T, typename Narrow = PreventNarrowing>
std::vector<T> readNexusVector(::NeXus::File &file, const std::string &entry = "") {
  const auto info_and_close = checkIfOpenAndGetInfo(file, std::move(std::move(entry)));
  RUN_NEXUSIOHELPER_FUNCTION(Narrow, (info_and_close.first).type, readNexusAnyVector, file,
                             vectorVolume((info_and_close.first).dims), info_and_close.second);
}
 
template <typename T, typename Narrow = PreventNarrowing>
void readNexusVector(std::vector<T> &out, ::NeXus::File &file, const std::string &entry = "") {
  const auto info_and_close = checkIfOpenAndGetInfo(file, std::move(std::move(entry)));
  RUN_NEXUSIOHELPER_FUNCTION(Narrow, (info_and_close.first).type, readNexusAnyVector, out, file,
                             vectorVolume((info_and_close.first).dims), info_and_close.second);
}
 
template <typename T, typename Narrow = PreventNarrowing>
std::vector<T> readNexusSlab(::NeXus::File &file, const std::string &entry, const std::vector<int64_t> &start,
                             const std::vector<int64_t> &size) {
  const auto info_and_close = checkIfOpenAndGetInfo(file, std::move(std::move(entry)));
  RUN_NEXUSIOHELPER_FUNCTION(Narrow, (info_and_close.first).type, readNexusAnySlab, file, start, size,
                             info_and_close.second);
}
 
template <typename T, typename Narrow = PreventNarrowing>
void readNexusSlab(std::vector<T> &out, ::NeXus::File &file, const std::string &entry,
                   const std::vector<int64_t> &start, const std::vector<int64_t> &size) {
  const auto info_and_close = checkIfOpenAndGetInfo(file, std::move(std::move(entry)));
  RUN_NEXUSIOHELPER_FUNCTION(Narrow, (info_and_close.first).type, readNexusAnySlab, out, file, start, size,
                             info_and_close.second);
}
 
template <typename T, typename Narrow = PreventNarrowing>
T readNexusValue(::NeXus::File &file, const std::string &entry = "") {
  const auto info_and_close = checkIfOpenAndGetInfo(file, std::move(std::move(entry)));
  RUN_NEXUSIOHELPER_FUNCTION(Narrow, (info_and_close.first).type, readNexusAnyVariable, file, info_and_close.second);
}
 
} // namespace NeXusIOHelper
} // namespace NeXus
} // namespace Mantid