MuonWorkspaceCreationHelper.cpp

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// Mantid Repository : https://github.com/mantidproject/mantid
//
// Copyright © 2018 ISIS Rutherford Appleton Laboratory UKRI,
//   NScD Oak Ridge National Laboratory, European Spallation Source,
//   Institut Laue - Langevin & CSNS, Institute of High Energy Physics, CAS
// SPDX - License - Identifier: GPL - 3.0 +
#include "MantidFrameworkTestHelpers/MuonWorkspaceCreationHelper.h"
 
#include "MantidFrameworkTestHelpers/ComponentCreationHelper.h"
#include "MantidFrameworkTestHelpers/InstrumentCreationHelper.h"
#include "MantidFrameworkTestHelpers/WorkspaceCreationHelper.h"
 
#include "MantidAPI/GroupingLoader.h"
#include "MantidAPI/MatrixWorkspace.h"
#include "MantidAPI/TableRow.h"
#include "MantidAPI/Workspace.h"
#include "MantidAPI/WorkspaceGroup.h"
#include "MantidDataObjects/TableWorkspace.h"
#include "MantidKernel/PhysicalConstants.h"
 
using namespace Mantid;
using namespace Mantid::Kernel;
using namespace Mantid::API;
 
namespace MuonWorkspaceCreationHelper {
 
// Generate y-values which increment by 1 each time the function is called
yDataCounts::yDataCounts() : m_count(-1) {}
double yDataCounts::operator()(const double, size_t) {
  m_count++;
  return static_cast<double>(m_count);
}
 
yDataAsymmetry::yDataAsymmetry(const double amp, const double phi) : m_amp(amp), m_phi(phi) {}
yDataAsymmetry::yDataAsymmetry() {
  m_amp = 1.5;
  m_phi = 0.1;
}
double yDataAsymmetry::operator()(const double t, size_t spec) {
  double e = exp(-t / tau);
  double factor = (static_cast<double>(spec) + 1.0) * 0.5;
  double phase_offset = 4 * M_PI / 180;
  return std::max(
      0.0, (10. * factor * (1.0 + m_amp * cos(m_omega * t + m_phi + static_cast<double>(spec) * phase_offset)) * e));
}
 
// Errors are fixed to 0.005
double eData::operator()(const double, size_t) { return 0.005; }
 
MatrixWorkspace_sptr createCountsWorkspace(size_t nspec, size_t maxt, double seed, size_t detectorIDseed, bool isHist,
                                           double xStart, double xEnd) {
 
  MatrixWorkspace_sptr ws = WorkspaceCreationHelper::create2DWorkspaceFromFunction(
      yDataCounts(), static_cast<int>(nspec), xStart, xEnd, (1.0 / static_cast<double>(maxt)), isHist, eData());
 
  ws->setInstrument(ComponentCreationHelper::createTestInstrumentCylindrical(static_cast<int>(nspec)));
 
  for (int g = 0; g < static_cast<int>(nspec); g++) {
    auto &spec = ws->getSpectrum(g);
    spec.addDetectorID(g + static_cast<int>(detectorIDseed));
    spec.setSpectrumNo(g + 1);
    ws->mutableY(g) += seed;
  }
 
  // Add number of good frames (required for Asymmetry calculation)
  ws->mutableRun().addProperty("goodfrm", 10);
  // Add instrument and run number
  std::shared_ptr<Geometry::Instrument> inst1 = std::make_shared<Geometry::Instrument>();
  inst1->setName("EMU");
  ws->setInstrument(inst1);
  ws->mutableRun().addProperty("run_number", 12345);
 
  return ws;
}
 
MatrixWorkspace_sptr createCountsWorkspace(size_t nspec, size_t maxt, double seed, size_t detectorIDseed) {
  return createCountsWorkspace(nspec, maxt, seed, detectorIDseed, true, 0.0, 1.0);
}
 
WorkspaceGroup_sptr createMultiPeriodWorkspaceGroup(const int &nPeriods, size_t nspec, size_t maxt,
                                                    const std::string &wsGroupName) {
 
  WorkspaceGroup_sptr wsGroup = std::make_shared<WorkspaceGroup>();
  AnalysisDataService::Instance().addOrReplace(wsGroupName, wsGroup);
 
  std::string wsNameStem = "MuonDataPeriod_";
  std::string wsName;
 
  std::shared_ptr<Geometry::Instrument> inst1 = std::make_shared<Geometry::Instrument>();
  inst1->setName("EMU");
 
  for (int period = 1; period < nPeriods + 1; period++) {
    // Period 1 yvalues : 1,2,3,4,5,6,7,8,9,10
    // Period 2 yvalues : 2,3,4,5,6,7,8,9,10,11 etc..
    MatrixWorkspace_sptr ws = createCountsWorkspace(nspec, maxt, period);
 
    wsGroup->addWorkspace(ws);
    wsName = wsNameStem + std::to_string(period);
    AnalysisDataService::Instance().addOrReplace(wsName, ws);
  }
 
  return wsGroup;
}
 
Mantid::API::WorkspaceGroup_sptr createMultiPeriodAsymmetryData(const int &nPeriods, size_t nspec, size_t maxt,
                                                                const std::string &wsGroupName) {
  Mantid::API::WorkspaceGroup_sptr wsGroup = std::make_shared<Mantid::API::WorkspaceGroup>();
  Mantid::API::AnalysisDataService::Instance().addOrReplace(wsGroupName, wsGroup);
 
  std::string wsNameStem = "MuonDataPeriod_";
  std::string wsName;
 
  std::shared_ptr<Mantid::Geometry::Instrument> inst1 = std::make_shared<Mantid::Geometry::Instrument>();
  inst1->setName("EMU");
 
  for (int period = 1; period < nPeriods + 1; period++) {
    Mantid::API::MatrixWorkspace_sptr ws =
        createAsymmetryWorkspace(nspec, maxt, yDataAsymmetry(10.0 * period, 0.1 * period));
 
    wsGroup->addWorkspace(ws);
    wsName = wsNameStem + std::to_string(period);
    Mantid::API::AnalysisDataService::Instance().addOrReplace(wsName, ws);
  }
 
  return wsGroup;
}
 
ITableWorkspace_sptr createDeadTimeTable(const size_t &nspec, std::vector<double> &deadTimes) {
 
  auto deadTimeTable =
      std::dynamic_pointer_cast<ITableWorkspace>(WorkspaceFactory::Instance().createTable("TableWorkspace"));
 
  deadTimeTable->addColumn("int", "Spectrum Number");
  deadTimeTable->addColumn("double", "Dead Time");
 
  if (deadTimes.size() != nspec) {
    return deadTimeTable;
  }
 
  for (size_t spec = 0; spec < deadTimes.size(); spec++) {
    TableRow newRow = deadTimeTable->appendRow();
    newRow << static_cast<int>(spec) + 1;
    newRow << deadTimes[spec];
  }
 
  return deadTimeTable;
}
 
ITableWorkspace_sptr createTimeZeroTable(const size_t &numSpec, const std::vector<double> &timeZeros) {
 
  auto timeZeroTable =
      std::dynamic_pointer_cast<ITableWorkspace>(WorkspaceFactory::Instance().createTable("TableWorkspace"));
 
  timeZeroTable->addColumn("double", "time zero");
 
  if (timeZeros.size() != numSpec) {
    return timeZeroTable;
  }
 
  for (size_t specNum = 0; specNum < numSpec; ++specNum) {
    TableRow row = timeZeroTable->appendRow();
    row << timeZeros[specNum];
  }
 
  return timeZeroTable;
}
 
MatrixWorkspace_sptr createWorkspaceWithInstrumentandRun(const std::string &instrName, int runNumber, size_t nSpectra) {
 
  Geometry::Instrument_const_sptr instr = std::make_shared<Geometry::Instrument>(instrName);
  MatrixWorkspace_sptr ws = WorkspaceFactory::Instance().create("Workspace2D", nSpectra, 1, 1);
  ws->setInstrument(instr);
  ws->mutableRun().addProperty("run_number", runNumber);
  return ws;
}
 
WorkspaceGroup_sptr createWorkspaceGroupConsecutiveDetectorIDs(const int &nWorkspaces, size_t nspec, size_t maxt,
                                                               const std::string &wsGroupName) {
 
  WorkspaceGroup_sptr wsGroup = std::make_shared<WorkspaceGroup>();
  AnalysisDataService::Instance().addOrReplace(wsGroupName, wsGroup);
 
  std::string wsNameStem = "MuonDataPeriod_";
  std::string wsName;
 
  for (int period = 1; period < nWorkspaces + 1; period++) {
    // Period 1 yvalues : 1,2,3,4,5,6,7,8,9,10
    // Period 2 yvalues : 2,3,4,5,6,7,8,9,10,11 etc..
    size_t detIDstart = (period - 1) * nspec + 1;
    MatrixWorkspace_sptr ws = createCountsWorkspace(nspec, maxt, period, detIDstart);
    wsGroup->addWorkspace(ws);
 
    wsName = wsNameStem + std::to_string(period);
    AnalysisDataService::Instance().addOrReplace(wsName, ws);
  }
 
  return wsGroup;
}
 
} // namespace MuonWorkspaceCreationHelper